2024/04/24 更新

写真a

スギエ アツシ
杉江 淳
SUGIE Atsushi
所属
脳研究所 生命科学リソース研究センター 准教授
職名
准教授
外部リンク

代表的な業績

学位

  • 博士(理学) ( 2010年9月   東京大学 )

研究キーワード

  • 希少疾患

研究分野

  • ライフサイエンス / ゲノム生物学

  • ライフサイエンス / 病態神経科学

  • ライフサイエンス / 分子生物学

経歴(researchmap)

  • 新潟大学   脳研究所   准教授

    2020年4月 - 現在

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  • 新潟大学   超域学術院   テニュアトラック助教

    2016年2月 - 2020年3月

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  • ドイツ神経変性疾患研究所   Tavosanis研究室

    2011年12月 - 2016年2月

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  • ドイツ マックスプランク研究所 神経生物学   鈴木研究室

    2010年10月 - 2011年12月

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  • 株式会社DHC   研究開発部 分析化学研究室   主任

    2005年4月 - 2007年3月

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経歴

  • 新潟大学   脳研究所   准教授

    2020年4月 - 現在

  • 新潟大学   研究推進機構 超域学術院   助教

    2016年2月 - 2020年3月

学歴

  • 東京大学大学院   理学系研究科   生物化学専攻

    2007年4月 - 2010年9月

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  • 神戸大学   自然科学研究科   生物環境制御学科

    2003年4月 - 2005年3月

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  • 神戸大学   農学部   生物環境制御学科

    1999年4月 - 2003年3月

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所属学協会

  • 日本神経化学会

    2022年9月 - 現在

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  • 日本神経科学学会

    2018年1月 - 現在

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論文

  • Functional analysis of RRAS2 pathogenic variants with a Noonan-like phenotype 査読

    Takaya Iida, Arisa Igarashi, Kae Fukunaga, Taiga Aoki, Tomomi Hidai, Kumiko Yanagi, Masahiko Yamamori, Kazuhito Satou, Hayato Go, Tomoki Kosho, Ryuto Maki, Takashi Suzuki, Yohei Nitta, Atsushi Sugie, Yoichi Asaoka, Makoto Furutani-Seiki, Tetsuaki Kimura, Yoichi Matsubara, Tadashi Kaname

    2024年3月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.3389/fgene.2024.1383176

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  • Complex formation of immunoglobulin superfamily molecules Side-IV and Beat-IIb regulates synaptic specificity. 査読 国際誌

    Jiro Osaka, Arisa Ishii, Xu Wang, Riku Iwanaga, Hinata Kawamura, Shogo Akino, Atsushi Sugie, Satoko Hakeda-Suzuki, Takashi Suzuki

    Cell reports   43 ( 2 )   113798 - 113798   2024年2月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Neurons establish specific synapses based on the adhesive properties of cell-surface proteins while also retaining the ability to form synapses in a relatively non-selective manner. However, comprehensive understanding of the underlying mechanism reconciling these opposing characteristics remains incomplete. Here, we have identified Side-IV/Beat-IIb, members of the Drosophila immunoglobulin superfamily, as a combination of cell-surface recognition molecules inducing synapse formation. The Side-IV/Beat-IIb combination transduces bifurcated signaling with Side-IV's co-receptor, Kirre, and a synaptic scaffold protein, Dsyd-1. Genetic experiments and subcellular protein localization analyses showed the Side-IV/Beat-IIb/Kirre/Dsyd-1 complex to have two essential functions. First, it narrows neuronal binding specificity through Side-IV/Beat-IIb extracellular interactions. Second, it recruits synapse formation factors, Kirre and Dsyd-1, to restrict synaptic loci and inhibit miswiring. This dual function explains how the combinations of cell-surface molecules enable the ranking of preferred interactions among neuronal pairs to achieve synaptic specificity in complex circuits in vivo.

    DOI: 10.1016/j.celrep.2024.113798

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  • Stretch-activated ion channel TMEM63B associates with developmental and epileptic encephalopathies and progressive neurodegeneration. 査読 国際誌

    Annalisa Vetro, Cristiana Pelorosso, Simona Balestrini, Alessio Masi, Sophie Hambleton, Emanuela Argilli, Valerio Conti, Simone Giubbolini, Rebekah Barrick, Gaber Bergant, Karin Writzl, Emilia K Bijlsma, Theresa Brunet, Pilar Cacheiro, Davide Mei, Anita Devlin, Mariëtte J V Hoffer, Keren Machol, Guido Mannaioni, Masamune Sakamoto, Manoj P Menezes, Thomas Courtin, Elliott Sherr, Riccardo Parra, Ruth Richardson, Tony Roscioli, Marcello Scala, Celina von Stülpnagel, Damian Smedley, Annalaura Torella, Jun Tohyama, Reiko Koichihara, Keisuke Hamada, Kazuhiro Ogata, Takashi Suzuki, Atsushi Sugie, Jasper J van der Smagt, Koen van Gassen, Stephanie Valence, Emma Vittery, Stephen Malone, Mitsuhiro Kato, Naomichi Matsumoto, Gian Michele Ratto, Renzo Guerrini

    American journal of human genetics   2023年6月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    By converting physical forces into electrical signals or triggering intracellular cascades, stretch-activated ion channels allow the cell to respond to osmotic and mechanical stress. Knowledge of the pathophysiological mechanisms underlying associations of stretch-activated ion channels with human disease is limited. Here, we describe 17 unrelated individuals with severe early-onset developmental and epileptic encephalopathy (DEE), intellectual disability, and severe motor and cortical visual impairment associated with progressive neurodegenerative brain changes carrying ten distinct heterozygous variants of TMEM63B, encoding for a highly conserved stretch-activated ion channel. The variants occurred de novo in 16/17 individuals for whom parental DNA was available and either missense, including the recurrent p.Val44Met in 7/17 individuals, or in-frame, all affecting conserved residues located in transmembrane regions of the protein. In 12 individuals, hematological abnormalities co-occurred, such as macrocytosis and hemolysis, requiring blood transfusions in some. We modeled six variants (p.Val44Met, p.Arg433His, p.Thr481Asn, p.Gly580Ser, p.Arg660Thr, and p.Phe697Leu), each affecting a distinct transmembrane domain of the channel, in transfected Neuro2a cells and demonstrated inward leak cation currents across the mutated channel even in isotonic conditions, while the response to hypo-osmotic challenge was impaired, as were the Ca2+ transients generated under hypo-osmotic stimulation. Ectopic expression of the p.Val44Met and p.Gly580Cys variants in Drosophila resulted in early death. TMEM63B-associated DEE represents a recognizable clinicopathological entity in which altered cation conductivity results in a severe neurological phenotype with progressive brain damage and early-onset epilepsy associated with hematological abnormalities in most individuals.

    DOI: 10.1016/j.ajhg.2023.06.008

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  • Drosophila model to clarify the pathological significance of OPA1 in autosomal dominant optic atrophy 査読

    Yohei Nitta, Jiro Osaka, Ryuto Maki, Satoko Hakeda-Suzuki, Emiko Suzuki, Satoshi Ueki, Takashi Suzuki, Atsushi Sugie

    eLife   2023年6月

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    担当区分:最終著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:eLife Sciences Publications, Ltd  

    Autosomal dominant optic atrophy (DOA) is a progressive form of blindness caused by degeneration of retinal ganglion cells and their axons, mainly caused by mutations in the OPA1 mitochondrial dynamin like GTPase (OPA1) gene. OPA1 encodes a dynamin-like GTPase present in the mitochondrial inner membrane. When associated with OPA1 mutations, DOA can present not only ocular symptoms but also multi-organ symptoms (DOA plus). DOA plus often results from point mutations in the GTPase domain, which are assumed to have dominant negative effects. However, the presence of mutations in the GTPase domain does not always result in DOA plus. Therefore, an experimental system to distinguish between DOA and DOA plus is needed. In this study, we found that loss-of-function mutations of the dOPA1 gene in Drosophila can imitate the pathology of optic nerve degeneration observed in DOA. We successfully rescued this degeneration by expressing the human OPA1 (hOPA1) gene, indicating that hOPA1 is functionally interchangeable with dOPA1 in the fly system. However, we could not rescue any previously reported mutations known to cause either DOA or DOA plus. By expressing both WT and DOA plus mutant hOPA1 forms in the optic nerve of dOPA1 mutants, we observed that DOA plus mutations suppressed the rescue, facilitating the distinction between loss-of-function and dominant negative mutations in hOPA1. The fly model developed in this study can assist in the differential diagnosis between DOA and DOA plus and inform early treatment decisions in patients with mutations in hOPA1.

    DOI: 10.7554/elife.87880.1

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  • Heterozygous loss-of-function DHX9 variants are associated with neurodevelopmental disorders: Human genetic and experimental evidences 査読 国際誌

    Mamiko Yamada, Yohei Nitta, Tomoko Uehara, Hisato Suzuki, Fuyuki Miya, Toshiki Takenouchi, Masaru Tamura, Shinya Ayabe, Atsushi Yoshiki, Akiteru Maeno, Yumiko Saga, Tamio Furuse, Ikuko Yamada, Nobuhiko Okamoto, Kenjiro Kosaki, Atsushi Sugie

    European Journal of Medical Genetics   66 ( 8 )   104804 - 104804   2023年6月

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    担当区分:最終著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Elsevier BV  

    DExH-box helicases are involved in unwinding of RNA and DNA. Among the 16 DExH-box genes, monoallelic variants of DHX16, DHX30, DHX34, and DHX37 are known to be associated with neurodevelopmental disorders. In particular, DHX30 is well established as a causative gene for neurodevelopmental disorders. Germline variants of DHX9, the closest homolog of DHX30, have not been reported until now as being associated with congenital disorders in humans, except that one de novo heterozygous variant, p.(Arg1052Gln) of the gene was identified during comprehensive screening in a patient with autism; unfortunately, the phenotypic details of this individual are unknown. Herein, we report a patients with a heterozygous de novo missense variant, p.(Gly414Arg) of DHX9 who presented with a short stature, intellectual disability, and ventricular non-compaction cardiomyopathy. The variant was located in the glycine codon of the ATP-binding site, G-C-G-K-T. To assess the pathogenicity of these variants, we generated transgenic Drosophila lines expressing human wild-type and mutant DHX9 proteins: 1) the mutant proteins showed aberrant localization both in the nucleus and the cytoplasm; 2) ectopic expression of wild-type protein in the visual system led to the rough eye phenotype, whereas expression of the mutant proteins had minimal effect; 3) overexpression of the wild-type protein in the retina led to a reduction in axonal numbers, whereas expression of the mutant proteins had a less pronounced effect. Furthermore, in a gene-editing experiment of Dhx9 G416 to R416, corresponding to p.(Gly414Arg) in humans, heterozygous mice showed a reduced body size, reduced emotionality, and cardiac conduction abnormality. In conclusion, we established that heterozygosity for a loss-of-function variant of DHX9 can lead to a new neurodevelopmental disorder.

    DOI: 10.1016/j.ejmg.2023.104804

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  • A novel NONO variant that causes developmental delay and cardiac phenotypes 査読 国際誌

    Toshiyuki Itai, Atsushi Sugie, Yohei Nitta, Ryuto Maki, Takashi Suzuki, Yoichi Shinkai, Yoshihiro Watanabe, Yusuke Nakano, Kazushi Ichikawa, Nobuhiko Okamoto, Yasuhiro Utsuno, Eriko Koshimizu, Atsushi Fujita, Kohei Hamanaka, Yuri Uchiyama, Naomi Tsuchida, Noriko Miyake, Kazuharu Misawa, Takeshi Mizuguchi, Satoko Miyatake, Naomichi Matsumoto

    Scientific Reports   13 ( 1 )   3954 - 3954   2023年1月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Springer Science and Business Media LLC  

    Abstract

    The Drosophila behavior/human splicing protein family is involved in numerous steps of gene regulation. In humans, this family consists of three proteins: SFPQ, PSPC1, and NONO. Hemizygous loss-of-function (LoF) variants in NONO cause a developmental delay with several complications (e.g., distinctive facial features, cardiac symptoms, and skeletal symptoms) in an X-linked recessive manner. Most of the reported variants have been LoF variants, and two missense variants have been reported as likely deleterious but with no functional validation. We report three individuals from two families harboring an identical missense variant that is located in the nuclear localization signal, NONO: NM_001145408.2:c.1375C > G p.(Pro459Ala). All of them were male and the variant was inherited from their asymptomatic mothers. Individual 1 was diagnosed with developmental delay and cardiac phenotypes (ventricular tachycardia and dilated cardiomyopathy), which overlapped with the features of reported individuals having NONO LoF variants. Individuals 2 and 3 were monozygotic twins. Unlike in Individual 1, developmental delay with autistic features was the only symptom found in them. A fly experiment and cell localization experiment showed that the NONO variant impaired its proper intranuclear localization, leading to mild LoF. Our findings suggest that deleterious NONO missense variants should be taken into consideration when whole-exome sequencing is performed on male individuals with developmental delay with or without cardiac symptoms.

    DOI: 10.1038/s41598-023-27770-6

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    その他リンク: https://www.nature.com/articles/s41598-023-27770-6

  • Direct evaluation of neuroaxonal degeneration with the causative genes of neurodegenerative diseases in <i>drosophila</i> using the automated axon quantification system, MeDUsA 査読 国際誌

    Yohei Nitta, Hiroki Kawai, Ryuto Maki, Jiro Osaka, Satoko Hakeda-Suzuki, Yoshitaka Nagai, Karolína Doubková, Tomoko Uehara, Kenji Watanabe, Kenjiro Kosaki, Takashi Suzuki, Gaia Tavosanis, Atsushi Sugie

    Human Molecular Genetics   32 ( 9 )   1524 - 1538   2023年1月

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    担当区分:最終著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Oxford University Press (OUP)  

    Abstract

    Drosophila is an excellent model organism for studying human neurodegenerative diseases (NDs). However, there is still almost no experimental system which could directly observe the degeneration of neurons and automatically quantify axonal degeneration. In this study, we created MeDUsA (a ‘method for the quantification of degeneration using fly axons’), a standalone executable computer program based on Python that combines a pre-trained deep-learning masking tool with an axon terminal counting tool. This software automatically quantifies the number of retinal R7 axons in Drosophila from a confocal z-stack image series. Using this software, we were able to directly demonstrate that axons were degenerated by the representative causative genes of NDs for the first time in Drosophila. The fly retinal axon is an excellent experimental system that is capable of mimicking the pathology of axonal degeneration in human NDs. MeDUsA rapidly and accurately quantifies axons in Drosophila photoreceptor neurons. It enables large-scale research into axonal degeneration, including screening to identify genes or drugs that mediate axonal toxicity caused by ND proteins and diagnose the pathological significance of novel variants of human genes in axons.

    DOI: 10.1093/hmg/ddac307

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  • Identification of genes regulating stimulus-dependent synaptic assembly in &lt;i&gt;Drosophila&lt;/i&gt; using an automated synapse quantification system 査読

    Jiro Osaka, Haruka Yasuda, Yusuke Watanuki, Yuya Kato, Yohei Nitta, Atsushi Sugie, Makoto Sato, Takashi Suzuki

    Genes &amp; Genetic Systems   97 ( 6 )   297 - 309   2023年

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Genetics Society of Japan  

    Neural activity-dependent synaptic plasticity is an important physiological phenomenon underlying environmental adaptation, memory and learning. However, its molecular basis, especially in presynaptic neurons, is not well understood. Previous studies have shown that the number of presynaptic active zones in the Drosophila melanogaster photoreceptor R8 is reversibly changed in an activity-dependent manner. During reversible synaptic changes, both synaptic disassembly and assembly processes were observed. Although we have established a paradigm for screening molecules involved in synaptic stability and several genes have been identified, genes involved in stimulus-dependent synaptic assembly are still elusive. Therefore, the aim of this study was to identify genes regulating stimulus-dependent synaptic assembly in Drosophila using an automated synapse quantification system. To this end, we performed RNAi screening against 300 memory-defective, synapse-related or transmembrane molecules in photoreceptor R8 neurons. Candidate genes were narrowed down to 27 genes in the first screen using presynaptic protein aggregation as a sign of synaptic disassembly. In the second screen, we directly quantified the decreasing synapse number using a GFP-tagged presynaptic protein marker. We utilized custom-made image analysis software, which automatically locates synapses and counts their number along individual R8 axons, and identified cirl as a candidate gene responsible for synaptic assembly. Finally, we present a new model of stimulus-dependent synaptic assembly through the interaction of cirl and its possible ligand, ten-a. This study demonstrates the feasibility of using the automated synapse quantification system to explore activity-dependent synaptic plasticity in Drosophila R8 photoreceptors in order to identify molecules involved in stimulus-dependent synaptic assembly.

    DOI: 10.1266/ggs.22-00114

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  • Studies of neurodegenerative diseases using <i>Drosophila</i> and the development of novel approaches for their analysis 査読 国際誌

    Yohei Nitta, Atsushi Sugie

    Fly   16 ( 1 )   275 - 298   2022年12月

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    担当区分:責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Informa UK Limited  

    The use of Drosophila in neurodegenerative disease research has contributed to the identification of modifier genes for the pathology. The basis for neurodegenerative disease occurrence in Drosophila is the conservation of genes across species and the ability to perform rapid genetic analysis using a compact brain. Genetic findings previously discovered in Drosophila can reveal molecular pathologies involved in human neurological diseases in later years. Disease models using Drosophila began to be generated during the development of genetic engineering. In recent years, results of reverse translational research using Drosophila have been reported. In this review, we discuss research on neurodegenerative diseases; moreover, we introduce various methods for quantifying neurodegeneration in Drosophila.

    DOI: 10.1080/19336934.2022.2087484

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  • A quantitative model of sporadic axonal degeneration in the Drosophila visual system. 査読 国際誌

    Mélisande Richard, Karolína Doubková, Yohei Nitta, Hiroki Kawai, Atsushi Sugie, Gaia Tavosanis

    The Journal of neuroscience : the official journal of the Society for Neuroscience   42 ( 24 )   4937 - 4952   2022年5月

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    担当区分:責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)  

    In human neurodegenerative diseases, neurons undergo axonal degeneration months to years before they die. Here, we developed a system modelling early degenerative events in Drosophila adult photoreceptor cells. Thanks to the stereotypy of their axonal projections, this system delivers quantitative data on sporadic and progressive axonal degeneration of photoreceptor cells. Using this method, we show that exposure of adult female flies to a constant light stimulation for several days overcomes the intrinsic resilience of R7 photoreceptors and leads to progressive axonal degeneration. This was not associated with apoptosis. We furthermore provide evidence that loss of synaptic integrity between R7 and a postsynaptic partner preceded axonal degeneration, thus recapitulating features of human neurodegenerative diseases. Finally, our experiments uncovered a role of postsynaptic partners of R7 to initiate degeneration, suggesting that postsynaptic cells signal back to the photoreceptor to maintain axonal structure. This model can be used to dissect cellular and circuit mechanisms involved in the early events of axonal degeneration, allowing for a better understanding of how neurons cope with stress and lose their resilience capacities.SIGNIFICANCE STATEMENT:Neurons can be active and functional for several years. In the course of ageing and in disease conditions leading to neurodegeneration, subsets of neurons lose their resilience and start dying. What initiates this turning point at the cellular level is not clear. Here, we developed a model allowing to systematically describe this phase. The loss of synapses and axons represents an early and functionally relevant event towards degeneration. Utilizing the ordered distribution of Drosophila photoreceptors axon terminals, we assembled a system to study sporadic initiation of axon loss and delineated a role for non-cell-autonomous activity regulation in the initiation of axon degeneration. This work will help shedding light on key steps in the etiology of non-familial cases of neurodegenerative diseases.

    DOI: 10.1523/JNEUROSCI.2115-21.2022

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  • Detoxification of amyloid β fibrils by curcumin derivatives and their verification in a Drosophila Alzheimer's model. 査読 国際誌

    Rohmad Yudi Utomo, Atsushi Sugie, Satoshi Okada, Kazuki Miura, Hiroyuki Nakamura

    Chemical communications (Cambridge, England)   58 ( 15 )   2576 - 2579   2022年2月

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    担当区分:責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Curcumin derivatives B and N were developed as disaggregation agents of amyloid β (Aβ) fibrils. The detoxification provided by each compound at a concentration of 1 μM was observed in neuroblastoma cells. Furthermore, both compounds significantly rescued locomotion dysfunction in an Aβ-expressing Drosophila model of Alzheimer's disease.

    DOI: 10.1039/d1cc07000b

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  • Candesartan prevents arteriopathy progression in cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy model. 査読 国際誌

    Taisuke Kato, Ri-Ichiroh Manabe, Hironaka Igarashi, Fuyuki Kametani, Sachiko Hirokawa, Yumi Sekine, Natsumi Fujita, Satoshi Saito, Yusuke Kawashima, Yuya Hatano, Shoichiro Ando, Hiroaki Nozaki, Akihiro Sugai, Masahiro Uemura, Masaki Fukunaga, Toshiya Sato, Akihide Koyama, Rie Saito, Atsushi Sugie, Yasuko Toyoshima, Hirotoshi Kawata, Shigeo Murayama, Masaki Matsumoto, Akiyoshi Kakita, Masato Hasegawa, Masafumi Ihara, Masato Kanazawa, Masatoyo Nishizawa, Shoji Tsuji, Osamu Onodera

    The Journal of clinical investigation   131 ( 22 )   2021年11月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Cerebral small vessel disease (CSVD) causes dementia and gait disturbance due to arteriopathy. Cerebral autosomal recessive arteriopathy with subcortical infarcts and leukoencephalopathy (CARASIL) is a hereditary form of CSVD caused by loss of high-temperature requirement A1 (HTRA1) serine protease activity. In CARASIL, arteriopathy causes intimal thickening, smooth muscle cell (SMC) degeneration, elastic lamina splitting, and vasodilation. The molecular mechanisms were proposed to involve the accumulation of matrisome proteins as substrates or abnormalities in transforming growth factor β (TGF-β) signaling. Here, we show that HTRA1-/- mice exhibited features of CARASIL-associated arteriopathy: intimal thickening, abnormal elastic lamina, and vasodilation. In addition, the mice exhibited reduced distensibility of the cerebral arteries and blood flow in the cerebral cortex. In the thickened intima, matrisome proteins, including the hub protein fibronectin (FN) and latent TGF-β binding protein 4 (LTBP-4), which are substrates of HTRA1, accumulated. Candesartan treatment alleviated matrisome protein accumulation and normalized the vascular distensibility and cerebral blood flow. Furthermore, candesartan reduced the mRNA expression of Fn1, Ltbp-4, and Adamtsl2, which are involved in forming the extracellular matrix network. Our results indicate that these accumulated matrisome proteins may be potential therapeutic targets for arteriopathy in CARASIL.

    DOI: 10.1172/JCI140555

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  • MeDUsA: A novel system for automated axon quantification to evaluate neuroaxonal degeneration

    Yohei Nitta, Hiroki Kawai, Jiro Osaka, Satoko Hakeda-Suzuki, Yoshitaka Nagai, Karolína Doubková, Takashi Suzuki, Gaia Tavosanis, Atsushi Sugie

    2021年10月

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    担当区分:責任著者   出版者・発行元:Cold Spring Harbor Laboratory  

    Abstract

    Background

    Drosophila is an excellent model organism for studying human neurodegenerative diseases (NDs), and the rough eye phenotype (REP) assay is a convenient experimental system for analysing the toxicity of ectopically expressed human disease genes. However, the association between REP and axonal degeneration, an early sign of ND, remains unclear. To address this question, we developed a method to evaluate axonal degeneration by quantifying the number of retinal R7 axons in Drosophila; however, it requires expertise and is time-consuming. Therefore, there is a need for an easy-to-use software that can automatically quantify the axonal degeneration.

    Result

    We created MeDUsA (a ‘method for the quantification of degeneration using fly axons’), which is a standalone executable computer program based on Python that combines a pre-trained deep-learning masking tool with an axon terminal counting tool. This software automatically quantifies the number of axons from a confocal z-stack image series. Using this software, we have demonstrated for the first time directly that axons degenerate when the causative factors of NDs (αSyn, Tau, TDP-43, HTT) were expressed in the Drosophila eye. Furthermore, we compared axonal toxicity of the representative causative genes of NDs and their pathological alleles with REP and found no significant correlation between them.

    Conclusions

    MeDUsA rapidly and accurately quantifies axons in Drosophila eye. By simplifying and automating time-consuming manual efforts requiring significant expertise, it enables large-scale, complex research efforts on axonal degeneration, such as screening to identify genes or drugs that mediate axonal toxicity caused by ND disease proteins.

    DOI: 10.1101/2021.10.25.465674

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  • De novo ARF3 variants cause neurodevelopmental disorder with brain abnormality. 査読 国際誌

    Masamune Sakamoto, Kazunori Sasaki, Atsushi Sugie, Yohei Nitta, Tetsuaki Kimura, Semra Gürsoy, Tayfun Cinleti, Mizue Iai, Toru Sengoku, Kazuhiro Ogata, Atsushi Suzuki, Nobuhiko Okamoto, Kazuhiro Iwama, Naomi Tsuchida, Yuri Uchiyama, Eriko Koshimizu, Atsushi Fujita, Kohei Hamanaka, Satoko Miyatake, Takeshi Mizuguchi, Masataka Taguri, Shuuichi Ito, Hidehisa Takahashi, Noriko Miyake, Naomichi Matsumoto

    Human molecular genetics   31 ( 1 )   69 - 81   2021年8月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    An optimal Golgi transport system is important for mammalian cells. The adenosine diphosphate (ADP) ribosylation factors (ARF) are key proteins for regulating cargo sorting at the Golgi network. In this family, ARF3 mainly works at the trans-Golgi network (TGN), and no ARF3-related phenotypes have yet been described in humans. We here report the clinical and genetic evaluations of two unrelated children with de novo pathogenic variants in the ARF3 gene: c.200A > T (p.Asp67Val) and c.296G > T (p.Arg99Leu). Although the affected individuals presented commonly with developmental delay, epilepsy, and brain abnormalities, there were differences in severity, clinical course, and brain lesions. In vitro subcellular localization assays revealed that the p.Arg99Leu mutant localized to Golgi apparatus, similar to the wild-type, whereas the p.Asp67Val mutant tended to show a disperse cytosolic pattern together with abnormally dispersed Golgi localization, similar to that observed in a known dominant negative variant (p.Thr31Asn). Pull-down assays revealed that the p.Asp67Val had a loss-of-function effect and the p.Arg99Leu variant had increased binding of the adaptor protein, Golgi-localized, γ-adaptin ear-containing, ARF-binding protein 1 (GGA1), supporting the gain of function. Furthermore, in vivo studies revealed that p.Asp67Val transfection led to lethality in flies. In contrast, flies expressing p.Arg99Leu had abnormal rough eye, as observed in the gain-of-function variant p.Gln71Leu. These data indicate that two ARF3 variants, the possibly loss-of-function p.Asp67Val and the gain-of-function p.Arg99Leu, both impair the Golgi transport system. Therefore, it may not be unreasonable that they showed different clinical features like diffuse brain atrophy (p.Asp67Val) and cerebellar hypoplasia (p.Arg99Leu).

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  • Glial insulin regulates cooperative or antagonistic Golden goal/Flamingo interactions during photoreceptor axon guidance. 査読 国際誌

    Hiroki Takechi, Satoko Hakeda-Suzuki, Yohei Nitta, Yuichi Ishiwata, Riku Iwanaga, Makoto Sato, Atsushi Sugie, Takashi Suzuki

    eLife   10   2021年3月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Transmembrane protein Golden goal (Gogo) interacts with atypical cadherin Flamingo (Fmi) to direct R8 photoreceptor axons in the Drosophila visual system. However, the precise mechanisms underlying Gogo regulation during columnar- and layer-specific R8 axon targeting are unknown. Our studies demonstrated that the insulin secreted from surface and cortex glia switches the phosphorylation status of Gogo, thereby regulating its two distinct functions. Non-phosphorylated Gogo mediates the initial recognition of the glial protrusion in the center of the medulla column, whereas phosphorylated Gogo suppresses radial filopodia extension by counteracting Flamingo to maintain a one axon-to-one column ratio. Later, Gogo expression ceases during the midpupal stage, thus allowing R8 filopodia to extend vertically into the M3 layer. These results demonstrate that the long- and short-range signaling between the glia and R8 axon growth cones regulates growth cone dynamics in a stepwise manner, and thus shapes the entire organization of the visual system.

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  • Analysing the evolutional and functional differentiation of four types of Daphnia magna cryptochrome in Drosophila circadian clock. 査読 国際誌

    Yohei Nitta, Sayaka Matsui, Yukine Kato, Yosuke Kaga, Kenkichi Sugimoto, Atsushi Sugie

    Scientific reports   9 ( 1 )   8857 - 8857   2019年6月

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    担当区分:責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Cryptochrome (CRY) plays an important role in the input of circadian clocks in various species, but gene copies in each species are evolutionarily divergent. Type I CRYs function as a photoreceptor molecule in the central clock, whereas type II CRYs directly regulate the transcriptional activity of clock proteins. Functions of other types of animal CRYs in the molecular clock remain unknown. The water flea Daphnia magna contains four Cry genes. However, it is still difficult to analyse these four genes. In this study, we took advantage of powerful genetic resources available from Drosophila to investigate evolutionary and functional differentiation of CRY proteins between the two species. We report differences in subcellular localisation of each D. magna CRY protein when expressed in the Drosophila clock neuron. Circadian rhythm behavioural experiments revealed that D. magna CRYs are not functionally conserved in the Drosophila molecular clock. These findings provide a new perspective on the evolutionary conservation of CRY, as functions of the four D. magna CRY proteins have diverse subcellular localisation levels. Furthermore, molecular clocks of D. magna have been evolutionarily differentiated from those of Drosophila. This study highlights the extensive functional diversity existing among species in their complement of Cry genes.

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  • Structural aspects of plasticity in the nervous system of Drosophila. 査読 国際誌

    Sugie A, Marchetti G, Tavosanis G

    Neural development   13 ( 1 )   14 - 14   2018年7月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)  

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  • Identification of glaikit in a genome-wide expression profiling for axonal bifurcation of the mushroom body in Drosophila 査読 国際誌

    Yohei Nitta, Atsushi Sugie

    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS   487 ( 4 )   898 - 902   2017年6月

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    担当区分:責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:ACADEMIC PRESS INC ELSEVIER SCIENCE  

    Axonal branching is a fundamental requirement for sending electrical signals to multiple targets. However, despite the importance of axonal branching in neural development and function, the molecular mechanisms that control branch formation are poorly understood. Previous studies have hardly addressed the intracellular signaling cascade of axonal bifurcation characterized by growth cone splitting. Recently we reported that DISCO interacting protein 2 (DIP2) regulates bifurcation of mushroom body axons in Drosophila melanogaster. DIP2 mutant displays ectopic bifurcations in alpha/beta neurons. Taking advantage of this phenomenon, we tried to identify genes involved in branching formation by comparing the transcriptome of wild type with that of DIP2 RNAi flies. After the microarray analysis, Glaikit (Gkt), a member of the phospholipase D superfamily, was identified as a downstream target of DIP2 by RNAi against gkt and qRT-PCR experiment. Single cell MARCM analysis of gkt mutant phenocopied the ectopic axonal branches observed in DIP2 mutant. Furthermore, a genetic analysis between gkt and DIP2 revealed that gkt potentially acts in parallel with DIP2. In conclusion, we identified a novel gene underlying the axonal bifurcation process. (C) 2017 The Authors. Published by Elsevier Inc.

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  • DISCO interacting protein 2 determines direction of axon projection under the regulation of c-Jun N-terminal kinase in the Drosophila mushroom body 査読 国際誌

    Yohei Nitta, Atsushi Sugie

    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS   487 ( 1 )   116 - 121   2017年5月

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    担当区分:責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:ACADEMIC PRESS INC ELSEVIER SCIENCE  

    Precisely controlled axon guidance for complex neuronal wiring is essential for appropriate neuronal function. c-Jun N-terminal kinase (INK) was found to play a role in axon guidance recently as well as in cell proliferation, protection and apoptosis. In spite of many genetic and molecular studies on these biological processes regulated by JNK, how JNK regulates axon guidance accurately has not been fully explained thus far. To address this question, we use the Drosophila mushroom body (MB) as a model since the alpha/beta axons project in two distinct directions. Here we show that DISCO interacting protein 2 (DIP2) is required for the accurate direction of axonal guidance. DIP2 expression is under the regulation of Basket (Bsk), the Drosophila homologue of JNK. We additionally found that the Bsk/DIP2 pathway is independent from the AP-I transcriptional factor complex pathway, which is directly activated by Bsk. In conclusion, our findings revealed DIP2 as a novel effector downstream of Bsk modulating the direction of axon projection. (C) 2017 The Authors. Published by Elsevier Inc.

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  • Analyzing Synaptic Modulation of Drosophila melanogaster Photoreceptors after Exposure to Prolonged Light 査読 国際誌

    Atsushi Sugie, Christoph Moehl, Satoko Hakeda-Suzuki, Hideaki Matsui, Takashi Suzuki, Gaia Tavosanis

    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS   ( 120 )   2017年2月

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    担当区分:筆頭著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:JOURNAL OF VISUALIZED EXPERIMENTS  

    The nervous system has the remarkable ability to adapt and respond to various stimuli. This neural adjustment is largely achieved through plasticity at the synaptic level. The Active Zone (AZ) is the region at the presynaptic membrane that mediates neurotransmitter release and is composed of a dense collection of scaffold proteins. AZs of Drosophila melanogaster (Drosophila) photoreceptors undergo molecular remodeling after prolonged exposure to natural ambient light. Thus the level of neuronal activity can rearrange the molecular composition of the AZ and contribute to the regulation of the functional output.
    Starting from the light exposure set-up preparation to the immunohistochemistry, this protocol details how to quantify the number, the spatial distribution, and the delocalization level of synaptic molecules at AZs in Drosophila photoreceptors. Using image analysis software, clusters of the GFP-fused AZ component Bruchpilot were identified for each R8 photoreceptor (R8) axon terminal. Detected Bruchpilot spots were automatically assigned to individual R8 axons. To calculate the distribution of spot frequency along the axon, we implemented a customized software plugin. Each axon's start-point and end-point were manually defined and the position of each Bruchpilot spot was projected onto the connecting line between start and end-point. Besides the number of Bruchpilot clusters, we also quantified the delocalization level of BruchpilotGFP within the clusters. These measurements reflect in detail the spatially resolved synaptic dynamics in a single neuron under different environmental conditions to stimuli.

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  • DISCO Interacting Protein 2 regulates axonal bifurcation and guidance of Drosophila mushroom body neurons 査読 国際誌

    Yohei Nitta, Daisuke Yamazaki, Atsushi Sugie, Makoto Hiroi, Tetsuya Tabata

    DEVELOPMENTAL BIOLOGY   421 ( 2 )   233 - 244   2017年1月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:ACADEMIC PRESS INC ELSEVIER SCIENCE  

    Axonal branching is one of the key processes within the enormous complexity of the nervous system to enable a single neuron to send information to multiple targets. However, the molecular mechanisms that control branch formation are poorly understood. In particular, previous studies have rarely addressed the mechanisms underlying axonal bifurcation, in which axons form new branches via splitting of the growth cone. We demonstrate that DISCO Interacting Protein 2 (DIP2) is required for precise axonal bifurcation in Drosophila mushroom body (MB) neurons by suppressing ectopic bifurcation and regulating the guidance of sister axons. We also found that DIP2 localize to the plasma membrane. Domain function analysis revealed that the AMP-synthetase domains of DIP2 are essential for its function, which may involve exerting a catalytic activity that modifies fatty acids. Genetic analysis and subsequent biochemical analysis suggested that DIP2 is involved in the fatty acid metabolization of acyl-CoA. Taken together, our results reveal a function of DIP2 in the developing nervous system and provide a potential functional relationship between fatty acid metabolism and axon morphogenesis.

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  • Molecular Remodeling of the Presynaptic Active Zone of Drosophila Photoreceptors via Activity-Dependent Feedback 査読 国際誌

    Atsushi Sugie, Satoko Hakeda-Suzuki, Emiko Suzuki, Marion Silies, Mai Shimozono, Christoph Moehl, Takashi Suzuki, Gaia Tavosanis

    NEURON   86 ( 3 )   711 - 725   2015年5月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:CELL PRESS  

    Neural activity contributes to the regulation of the properties of synapses in sensory systems, allowing for adjustment to a changing environment. Little is known about how synaptic molecular components are regulated to achieve activity-dependent plasticity at central synapses. Here, we found that after prolonged exposure to natural ambient light the presynaptic active zone in Drosophila photoreceptors undergoes reversible remodeling, including loss of Bruchpilot, DLiprin-alpha, and DRBP, but not of DSyd-1 or Cacophony. The level of depolarization of the postsynaptic neurons is critical for the light-induced changes in active zone composition in the photoreceptors, indicating the existence of a feedback signal. In search of this signal, we have identified a crucial role of microtubule meshwork organization downstream of the divergent canonical Wnt pathway, potentially via Kinesin-3 Imac. These data reveal that active zone composition can be regulated in vivo and identify the underlying molecular machinery.

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  • Assessing the Role of Cell-Surface Molecules in Central Synaptogenesis in the Drosophila Visual System 査読 国際誌

    Sandra Berger-Mueller, Atsushi Sugie, Fumio Takahashi, Gaia Tavosanis, Satoko Hakeda-Suzuki, Takashi Suzuki

    PLOS ONE   8 ( 12 )   e83732   2013年12月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:PUBLIC LIBRARY SCIENCE  

    A hallmark of the central nervous system is its spatial and functional organization in synaptic layers. During neuronal development, axons form transient contacts with potential post-synaptic elements and establish synapses with appropriate partners at specific layers. These processes are regulated by synaptic cell-adhesion molecules. In the Drosophila visual system, R7 and R8 photoreceptor subtypes target distinct layers and form en passant pre-synaptic terminals at stereotypic loci of the axonal shaft. A leucine-rich repeat transmembrane protein, Capricious (Caps), is known to be selectively expressed in R8 axons and their recipient layer, which led to the attractive hypothesis that Caps mediates R8 synaptic specificity by homophilic adhesion. Contradicting this assumption, our results indicate that Caps does not have a prominent role in synaptic-layer targeting and synapse formation in Drosophila photoreceptors, and that the specific recognition of the R8 target layer does not involve Caps homophilic axon-target interactions. We generated flies that express a tagged synaptic marker to evaluate the presence and localization of synapses in R7 and R8 photoreceptors. These genetic tools were used to assess how the synaptic profile is affected when axons are forced to target abnormal layers by expressing axon guidance molecules. When R7 axons were mistargeted to the R8-recipient layer, R7s either maintained an R7-like synaptic profile or acquired a similar profile to r8s depending on the overexpressed protein. When R7 axons were redirected to a more superficial medulla layer, the number of presynaptic terminals was reduced. These results indicate that cell-surface molecules are able to dictate synapse loci by changing the axon terminal identity in a partially cell-autonomous manner, but that presynapse formation at specific sites also requires complex interactions between pre- and post-synaptic elements.

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  • Recognition of pre- and postsynaptic neurons via nephrin/NEPH1 homologs is a basis for the formation of the Drosophila retinotopic map 査読 国際誌

    Atsushi Sugie, Daiki Umetsu, Tetsuo Yasugi, Karl-Friedrich Fischbach, Tetsuya Tabata

    DEVELOPMENT   137 ( 19 )   3303 - 3313   2010年10月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:COMPANY OF BIOLOGISTS LTD  

    Topographic maps, which maintain the spatial order of neurons in the order of their axonal connections, are found in many parts of the nervous system. Here, we focus on the communication between retinal axons and their postsynaptic partners, lamina neurons, in the first ganglion of the Drosophila visual system, as a model for the formation of topographic maps. Post-mitotic lamina precursor cells differentiate upon receiving Hedgehog signals delivered through newly arriving retinal axons and, before maturing to extend neurites, extend short processes toward retinal axons to create the lamina column. The lamina column provides the cellular basis for establishing stereotypic synapses between retinal axons and lamina neurons. In this study, we identified two cell-adhesion molecules: Hibris, which is expressed in post-mitotic lamina precursor cells; and Roughest, which is expressed on retinal axons. Both proteins belong to the nephrin/NEPH1 family. We provide evidence that recognition between post-mitotic lamina precursor cells and retinal axons is mediated by interactions between Hibris and Roughest. These findings revealed mechanisms by which axons of presynaptic neurons deliver signals to induce the development of postsynaptic partners at the target area. Postsynaptic partners then recognize the presynaptic axons to make ensembles, thus establishing a topographic map along the anterior/posterior axis.

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  • Coordinated sequential action of EGFR and Notch signaling pathways regulates proneural wave progression in the Drosophila optic lobe 査読 国際誌

    Tetsuo Yasugi, Atsushi Sugie, Daiki Umetsu, Tetsuya Tabata

    DEVELOPMENT   137 ( 19 )   3193 - 3203   2010年10月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:COMPANY OF BIOLOGISTS LTD  

    During neurogenesis in the medulla of the Drosophila optic lobe, neuroepithelial cells are programmed to differentiate into neuroblasts at the medial edge of the developing optic lobe. The wave of differentiation progresses synchronously in a row of cells from medial to the lateral regions of the optic lobe, sweeping across the entire neuroepithelial sheet; it is preceded by the transient expression of the proneural gene lethal of scute [l(1)sc] and is thus called the proneural wave. We found that the epidermal growth factor receptor (EGFR) signaling pathway promotes proneural wave progression. EGFR signaling is activated in neuroepithelial cells and induces l(1) sc expression. EGFR activation is regulated by transient expression of Rhomboid (Rho), which is required for the maturation of the EGF ligand Spitz. Rho expression is also regulated by the EGFR signal. The transient and spatially restricted expression of Rho generates sequential activation of EGFR signaling and assures the directional progression of the differentiation wave. This study also provides new insights into the role of Notch signaling. Expression of the Notch ligand Delta is induced by EGFR, and Notch signaling prolongs the proneural state. Notch signaling activity is downregulated by its own feedback mechanism that permits cells at proneural states to subsequently develop into neuroblasts. Thus, coordinated sequential action of the EGFR and Notch signaling pathways causes the proneural wave to progress and induce neuroblast formation in a precisely ordered manner.

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  • Sunspot, a link between Wingless signaling and endoreplication in Drosophila 査読 国際誌

    Kenzui Taniue, Ayumu Nishida, Fumihiko Hamada, Atsushi Sugie, Takeaki Oda, Kumiko Ui-Tei, Tetsuya Tabata, Tetsu Akiyama

    DEVELOPMENT   137 ( 10 )   1755 - 1764   2010年5月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:COMPANY OF BIOLOGISTS LTD  

    The Wingless (Wg)/Wnt signaling pathway is highly conserved throughout many multicellular organisms. It directs the development of diverse tissues and organs by regulating important processes such as proliferation, polarity and the specification of cell fates. Upon activation of the Wg/Wnt signaling pathway, Armadillo (Arm)/beta-catenin is stabilized and interacts with the TCF family of transcription factors, which in turn activate Wnt target genes. We show here that Arm interacts with a novel BED (BEAF and Dref) finger protein that we have termed Sunspot (Ssp). Ssp transactivates Drosophila E2F-1 (dE2F-1) and PCNA expression, and positively regulates the proliferation of imaginal disc cells and the endoreplication of salivary gland cells. Wg negatively regulates the function of Ssp by changing its subcellular localization in the salivary gland. In addition, Ssp was found not to be involved in the signaling pathway mediated by Arm associated with dTCF. Our findings indicate that Arm controls development in part by regulating the function of Ssp.

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  • Mitochondrial alternative pathway is associated with development of freezing tolerance in common wheat 査読 国際誌

    Nobuyuki Mizuno, Atsushi Sugie, Fuminori Kobayashi, Shigeo Takumi

    JOURNAL OF PLANT PHYSIOLOGY   165 ( 4 )   462 - 467   2008年

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:ELSEVIER GMBH, URBAN & FISCHER VERLAG  

    Cold acclimation is an adaptive process for acquiring cold/freezing tolerance in wheat. To clarify the cultivar difference of freezing tolerance, we compared mitochondrial respiration activity and the expression profile of alternative oxidase (AOX) genes under low-temperature conditions using two common wheat cultivars differing in freezing tolerance. During cold acclimation, the respiration capacity of the alternative pathway significantly increased in a freezing-tolerant cultivar compared with a freezing-sensitive cultivar. More abundant accumulation of the AOX and uncoupling protein gene transcripts was also observed under the low-temperature conditions in the tolerant cultivar than in the sensitive cultivar. These results suggest that the mitochondrial alternative pathway might be partly associated with the cold acclimation and freezing tolerance in wheat. (C) 2007 Elsevier GmbH. All rights reserved.

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  • Alteration of respiration capacity and transcript accumulation level of alternative oxidase genes in necrosis lines of common wheat 査読

    Atsushi Sugie, Koji Murai, Shigeo Takumi

    GENES & GENETIC SYSTEMS   82 ( 3 )   231 - 239   2007年6月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:GENETICS SOC JAPAN  

    Mitochondrial alternative oxidase (AOX) is the terminal oxidase responsible for cyanide-insensitive and salicylhydroxamic acid-sensitive respiration in plants. AOX is a key enzyme of the alternative respiration pathway. To study the effects of necrotic cell death on the mitochondrial function, production of reactive oxygen species (ROS), respiration capacities and accumulation patterns of mitochondria-targeted protein-encoding gene transcripts were compared between wild-type, lesion-mimic mutant and hybrid necrosis wheat plants. Around cells with the necrosis symptom, ROS accumulated abundantly in the intercellular spaces. The ratio of the alternative pathway to the cytochrome pathway was markedly enhanced in the necrotic leaves. Transcripts of a wheat AOX gene, Waox1a, were more abundant in a novel lesion-mimic mutant of common wheat than in the wildtype plants. An increased level of the Waox1a transcripts was also observed in hybrid plants containing Ne1 and Ne2 genes. These results indicated that an increase of the wheat AOX transcript level resulted in enhancement of respiration capacity of the alternative pathway in the necrotic cells.

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  • Overexpression of wheat alternative oxidase gene Waox1a alters respiration capacity and response to reactive oxygen species under low temperature in transgenic Arabidopsis 査読

    Atsushi Sugie, Nayden Naydenov, Nobuyuki Mizuno, Chiharu Nakamura, Shigeo Takumi

    GENES & GENETIC SYSTEMS   81 ( 5 )   349 - 354   2006年10月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:GENETICS SOC JAPAN  

    Under low temperature conditions, the cytochrome pathway of respiration is repressed and reactive oxygen species (ROS) are produced in plants. Mitochondrial alternative oxidase (AOX) is the terminal oxidase responsible for the cyanide-insensitive and salicylhydroxamic acid-sensitive respiration. To study functions of wheat AOX genes under low temperature, we produced transgenic Arabidopsis by introducing Waox1a expressed under control of the cauliflower mosaic virus (CaMV) 35S promoter in Arabidopsis thaliana. The enhancement of endogenous AOX1a expression via low temperature stress was delayed in the transgenic Arabidopsis. Recovery of the total respiration activity under low temperature occurred more rapidly in the transgenic plants than in the wild-type plants due to a constitutively increased alternative pathway capacity. Levels of ROS decreased in the transgenic plants under low temperature stress. These results support the hypothesis that AOX alleviates oxidative stress when the cytochrome pathway of respiration is inhibited under abiotic stress conditions.

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MISC

  • 【代謝】代謝と神経 PI(4,5)P2代謝と神経変性の分子基盤 招待

    新田 陽平, 小坂 二郎, 杉江 淳

    生体の科学   74 ( 5 )   422 - 423   2023年10月

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  • 後シナプスニューロンの神経活動に依存的なフィードバックシグナルを介したショウジョウバエの視細胞における活性帯の構成タンパク質の再編成 招待

    杉江 淳, Tavosanis Gaia, 鈴木 崇之

    ライフサイエンス新着論文レビュー   2015年

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    記述言語:日本語   掲載種別:記事・総説・解説・論説等(商業誌、新聞、ウェブメディア)  

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  • Molecular remodeling of the presynaptic active zone of Drosophila photoreceptors via an activity-dependent feedback signal

    Atsushi Sugie, Satoko Hakeda, Emiko Suzuki, Gaia Tavosanis, Takashi Suzuki

    GENES & GENETIC SYSTEMS   89 ( 6 )   318 - 318   2014年12月

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    記述言語:英語   掲載種別:研究発表ペーパー・要旨(国際会議)   出版者・発行元:GENETICS SOC JAPAN  

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  • A Genetic approach to elucidate the central synapse plasticity

    Atsushi Sugie, Satoko Hakeda, Emiko Suzuki, Gaia Tavosanis, Takashi Suzuki

    GENES & GENETIC SYSTEMS   88 ( 6 )   339 - 339   2013年12月

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    記述言語:英語   掲載種別:研究発表ペーパー・要旨(国際会議)   出版者・発行元:GENETICS SOC JAPAN  

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  • 神経回路形成におけるシナプス前後細胞間認識に必要な因子の網羅的探索:ショウジョウバエ視覚系神経節の形成をモデルとして

    杉江淳, 梅津大輝, 多羽田哲也

    生化学   2008年

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  • Structural diversity of the wheat nuclear gene waox1a encoding mitochondrial alternative oxidase, a single unique enzyme in the cyanide-resistant alternative pathway 査読

    N. Naydenov, S. Takumi, A. Sugie, Y. Ogihara, A. Atanassov, C. Nakamura

    Biotechnology and Biotechnological Equipment   19 ( 1 )   48 - 56   2005年

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    記述言語:英語  

    Alternative respiratory pathways other than the main cytochrome pathway are present in plant mitochondria, one of which is represented by a single unique enzyme alternative oxidase (AOX). Two genes encoding AOX proteins in common wheat have already been characterized (24). To further understand the structural diversity of the Aox genes in wheat, we screened the common wheat genome library for additional members of this small multigene family. Twelve Aox-related sequences were detected by Southern blot and restriction analyses and four of them were successfully subcloned and sequenced. All of the newly isolated sequences appear to be more closely related to the wheat gene Waox1a than Waox1c. Structural analysis showed that one clone was identical to Waox1a and three others appeared to be non-functional as they contained insertion/deletion mutations and/or frame-shift mutations leading to in-frame stop codons on different locations. In addition, one genomic clone highly homologous to the Waox1a cDNA sequence was identified. This cDNA-like sequence was also identified in the genomes of diploid, tetraploid and hexaploid wheat accessions. Although its origin remained unknown, our result indicated that it evolved before divergence of the ancestral wheat genomes. © 2005 Taylor and Francis Group, LLC.

    DOI: 10.1080/13102818.2005.10817153

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講演・口頭発表等

  • ハエを用いた神経変性疾患の遺伝的要因の検出 招待

    杉江 淳

    国立遺伝学研究所国際シンポジウム2023  2023年11月 

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    開催年月日: 2023年11月

    記述言語:英語   会議種別:口頭発表(招待・特別)  

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  • 優性優性視神経萎縮の発症に関与するOPA1変異の病理的意義を検証するショウジョウバエモデルの確立

    杉江 淳

    第46回日本神経科学大会  2023年8月 

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    開催年月日: 2023年8月

    記述言語:英語   会議種別:口頭発表(一般)  

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  • 機能性アミロイドの探索

    杉江淳

    第66回日本神経化学会大会  2023年7月 

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    開催年月日: 2023年7月

    記述言語:英語   会議種別:シンポジウム・ワークショップ パネル(公募)  

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  • ショウジョウバエモデルを用いた軸索変性の定量

    第15回日本ショウジョウバエ研究会  2022年9月 

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    開催年月日: 2022年9月

    記述言語:英語   会議種別:口頭発表(一般)  

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  • ニューロン間およびニューロン-グリア間の相互作用を介した軸索変性機序の解明

    杉江 淳

    第45回日本神経科学大会  2022年7月 

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    開催年月日: 2022年6月 - 2022年7月

    記述言語:英語   会議種別:口頭発表(一般)  

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  • 遺伝子変異の効果を簡便にスクリーニングするin vivoシステム 招待

    杉江 淳

    第64回日本小児神経学会学術集会  2022年6月 

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    開催年月日: 2022年6月

    記述言語:日本語   会議種別:口頭発表(招待・特別)  

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  • ショウジョウバエを用いた軸索変性の初期病態解析

    第14回日本ショウジョウバエ研究集会  2021年9月 

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    開催年月日: 2021年9月

    記述言語:英語   会議種別:口頭発表(一般)  

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  • ショウジョウバエをモデルとした細胞間コミュニケーション障害を伴う神経変性過程の解析

    第43回日本神経科学大会  2020年7月 

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    記述言語:英語   会議種別:口頭発表(一般)  

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  • Elucidation of neurodegenerative process with mitochondrial dysfunction using Drosophila model 招待

    杉江 淳

    The 92nd annual meeting of the Japanese biochemical society  2019年9月 

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    記述言語:英語   会議種別:シンポジウム・ワークショップ パネル(公募)  

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  • Elucidation of neurodegenerative process with impairment of intercellular communication using Drosophila model 招待

    杉江 淳

    NEURO2019  2019年7月 

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    記述言語:英語   会議種別:シンポジウム・ワークショップ パネル(公募)  

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  • Synaptic and neuronal degeneration through the excessive visual stimulation.

    杉江 淳

    The 41rd Annual Meeting of the Japan Neuroscience Society  2018年7月 

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    記述言語:英語   会議種別:口頭発表(一般)  

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共同研究・競争的資金等の研究

  • 未診断疾患イニシアチブ(Initiative on Rare and Undiagnosed Diseases(IRUD)): 希少・未診断疾患に対する診断プログラム基盤の 開発と患者還元を推進する研究

    2024年4月 - 2028年3月

    制度名:難治性疾患実用化研究事業

    提供機関:日本医療研究開発機構

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    担当区分:研究分担者 

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  • アミロイドの新たな側面:神経細胞の生存メカニズムへの寄与

    2024年4月 - 2028年3月

    制度名:科学研究費助成事業 基盤研究(B)

    研究種目:基盤研究(B)

    提供機関:日本学術振興会

    杉江淳, 松木陽

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    担当区分:研究代表者 

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  • 神経炎症の起点を制御する分子機構の解明

    2023年9月 - 2028年3月

    制度名:研究助成

    研究種目:生命科学研究助成

    提供機関:武田科学研究財団

    杉江淳

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    担当区分:研究代表者 

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  • J-RDMMによる小型モデル生物を用いた希少・未診断疾患のin vivo解析

    研究課題/領域番号:23ek0109650s0201

    2023年5月 - 2024年3月

    制度名:難治性疾患実用化研究事業

    提供機関:日本医療研究開発機構

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    担当区分:研究分担者 

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  • 全身性エリテマトーデスの発病を惹起させるために必要とされる未知の分子機構候補探索

    研究課題/領域番号:AS2021A000166849

    2021年9月 - 2023年3月

    制度名:GSKジャパン研究助成

    提供機関:グラクソスミスクラインジャパン

    杉江淳

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    担当区分:研究代表者 

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  • タウオパチー病態機序解明を目指すゲノムリソースの網羅的機能解析

    研究課題/領域番号:21H02837

    2021年4月 - 2024年3月

    制度名:科学研究費助成事業 基盤研究(B)

    研究種目:基盤研究(B)

    提供機関:日本学術振興会

    杉江 淳, 池内 健, 新田 陽平

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    担当区分:研究代表者 

    配分額:17680000円 ( 直接経費:13600000円 、 間接経費:4080000円 )

    アルツハイマー病をはじめとするタウオパチーは,微小管結合タンパク質のタウが細胞内に異常蓄積することが定義されているが,遺伝的要因の大多数は未だ不明である.私たちが持つ国内最大規模のタウオパチーゲノムリソースを解析し,アリル頻度の少ないミスセンス変異見出した。その中に未知なる病因関連遺伝子が存在すると考えた.本研究では,これらの変異の中からタウオパチーに関連する機能的な変異を特定し,本疾患の病態像を明らかにする。これまでに私たちはTau、SORL1、BSN、ABCA7の変異を発現させるショウジョウバエの遺伝子組換え体を作製した。

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  • シヌクレイノパチーにおける病態伝播マスター遺伝子の網羅的探索

    2019年7月 - 2021年3月

    制度名:挑戦的研究(萌芽)

    提供機関:日本学術振興会

    杉江 淳, 永井 義隆, 鈴木 マリ

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    担当区分:研究代表者  資金種別:競争的資金

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  • J-RDMM:モデル生物コーディネーティングネットワークによる希少・未診断疾患メカニズム解析

    2018年11月 - 2023年3月

    制度名:難治性疾患実用化研究事業

    提供機関:日本医療研究開発機構

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    担当区分:研究分担者 

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  • 人工光が引き起こすトリパータイトシナプス障害の発症機序解明

    2018年9月 - 2020年3月

    制度名:ライフサイエンス研究助成

    提供機関:武田科学振興財団

    杉江 淳

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    担当区分:研究代表者  資金種別:競争的資金

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  • 知覚細胞の変性メカニズムの解明

    2018年8月 - 2019年3月

    制度名:助成金

    提供機関:永井NS知覚科学振興財団

    杉江 淳

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    担当区分:研究代表者  資金種別:競争的資金

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  • TDP-43の細胞外放出機構と細胞内取り込み機構の解明

    2017年6月 - 2018年3月

    制度名:助成金

    提供機関:成茂神経科学研究助成基金

    杉江 淳

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    担当区分:研究代表者  資金種別:競争的資金

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  • 前シナプスの神経細胞保護機能における活性体構造変化の重要性の検討

    2017年4月 - 2020年3月

    制度名:若手研究(A)

    提供機関:日本学術振興会

    杉江 淳

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    担当区分:研究代表者  資金種別:競争的資金

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  • TDP-43が細胞間を伝播するメカニズムの解明

    2017年4月 - 2018年3月

    制度名:ALSの研究助成基金

    提供機関:公益信託「生命の彩」

    杉江 淳

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    担当区分:研究代表者  資金種別:競争的資金

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  • トランスクリプトーム解析による神経変性疾患間の比較

    2017年2月 - 2019年3月

    制度名:研究奨励金

    提供機関:上原記念生命科学財団

    杉江 淳

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    担当区分:研究代表者  資金種別:競争的資金

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  • 神経回路形成に機能するシナプス前後細胞間認識の分子機構

    研究課題/領域番号:09J08033

    2009年 - 2010年

    制度名:科学研究費助成事業

    研究種目:特別研究員奨励費

    提供機関:日本学術振興会

    杉江 淳

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    担当区分:研究代表者 

    配分額:1400000円 ( 直接経費:1400000円 )

    脳の高次機能を司る中枢神経系は複雑かつ精密な神経回路から成る。神経回路が形成されるためには、その基本単位であるシナプス前神経細胞とシナプス後神経細胞が正確な場所と時期にマッチングする必要がある。しかし、シナプス前後細胞が決められた場所でお互いを認識し、正しく結合していく分子機構について未知な点を多く残す。この問題を解明するために、ショウジョウバエの一次視覚系神経節であるラミナの形成に着目した。ラミナは、主に視神経軸索(シナプス前)とラミナ神経細胞(シナプス後)から構成され、規則正しい構造を持つ神経節である。
    本研究では、ラミナ神経細胞が視神経軸索に会合する過程において働く実行因子を特定し、正確な神経ネットワークを構築する分子メカニズムを解明することを目的とした。そのために、シナプス前後細胞が相互認識できない変異体を用いてマイクロアレイによる網羅的なスクリーニングを行った。スクリーニングと解析の結果、脊椎動物のNephrinホモログである細胞接着因子、Hibris (Hbs)がラミナ神経細胞で機能することが明らかになった。ラミナ神経細胞で発現する細胞接着因子Hbsは、視神経軸索で発現するパートナー分子と結合する事で働いていると考えられた。Hbsのパートナー分子探索の結果、視神経で働く因子としてNEPH1ホモログであるRoughest (Rst)を同定した。本研究から、ショウジョウバエの視覚系中枢において、シナプス前後細胞の正確な位置関係が形成される際の細胞間コミュニケーションにNephrin/NEPH1ホモログの細胞接着が関与する事が示された。この成果は、脊椎動物の神経中枢におけるシナプス前後神経細胞間認識のさらなる理解に繋がる可能性がある。

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担当経験のある授業科目

  • 遺伝看護学特論Ⅱ

    2018年
    -
    現在
    機関名:新潟大学

  • 遺伝看護学特論Ⅵ

    2018年
    -
    現在
    機関名:新潟大学

  • 遺伝看護学特論Ⅰ

    2018年
    -
    現在
    機関名:新潟大学

  • 先端医科学研究概説

    2017年
    -
    現在
    機関名:新潟大学