2024/11/13 更新

写真a

オカモト サトル
岡本 暁
OKAMOTO Satoru
所属
教育研究院 自然科学系 農学系列 准教授
農学部 農学科 准教授
職名
准教授
外部リンク

学位

  • 博士(理学) ( 2009年3月   東京大学 )

研究キーワード

  • ダイズ

  • ミヤコグサ

  • ペプチド

  • シンク‐ソース

  • シロイヌナズナ

  • 道管液

  • 器官間シグナル伝達

研究分野

  • ライフサイエンス / 分子生物学

  • ライフサイエンス / 植物分子、生理科学

  • ライフサイエンス / 植物栄養学、土壌学

経歴

  • 新潟大学   農学部 農学科   准教授

    2022年12月 - 現在

  • 新潟大学   教育研究院 自然科学系 農学系列   准教授

    2022年12月 - 現在

  • 新潟大学   農学部   助教

    2017年12月 - 2022年11月

所属学協会

 

論文

  • Root-knot nematode modulates plant CLE3-CLV1 signaling as a long-distance signal for successful infection 査読

    Satoru Nakagami, Michitaka Notaguchi, Tatsuhiko Kondo, Satoru Okamoto, Takanori Ida, Yoshikatsu Sato, Tetsuya Higashiyama, Allen Yi-Lun Tsai, Takashi Ishida, Shinichiro Sawa

    Science Advances   9 ( 22 )   2023年6月

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    掲載種別:研究論文(学術雑誌)   出版者・発行元:American Association for the Advancement of Science (AAAS)  

    Plants use many long-distance and systemic signals to modulate growth and development, as well as respond to biotic and abiotic stresses. Parasitic nematodes infect host plant roots and cause severe damage to crop plants. However, the molecular mechanisms that regulate parasitic nematode infections are still unknown. Here, we show that plant parasitic root-knot nematodes (RKNs), Meloidogyne incognita , modulate the host CLAVATA3 (CLV3)/EMBRYO SURROUNDING REGION (CLE)–CLV1 signaling module to promote the infection progression. Plants deficient in the CLE signaling pathway show enhanced RKN resistance, whereas CLE overexpression leads to increased susceptibility toward RKN. Grafting analysis shows that CLV1 expression in the shoot alone is sufficient to positively regulate RKN infection. Together with results from the split-root culture system, infection assays, and CLE3-CLV1 binding assays, we conclude that mobile root-derived CLE signals are perceived by CLV1 in the shoot, which subsequently produce systemic signals to promote gall formation and RKN reproduction.

    DOI: 10.1126/sciadv.adf4803

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  • Comparative anatomical and hormonal analyses between kohlrabi and broccoli seedlings: Relevance to kohlrabi stem tuber initiation 査読

    Md. Nuruzzaman, Mikiko Kojima, Masato Sato, Yumiko Takebayashi, Mozammel Hoque, Satoru Okamoto, Daniel J. Shea, Ryo Fujimoto, Eigo Fukai, Hitoshi Sakakibara, Keiichi Okazaki

    Scientia Horticulturae   316   112002 - 112002   2023年6月

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    掲載種別:研究論文(学術雑誌)   出版者・発行元:Elsevier BV  

    DOI: 10.1016/j.scienta.2023.112002

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  • Collection of Xylem Exudates from the Model Plant Arabidopsis and the Crop Plant Soybean 査読

    Satoru OKamoto, Azusa Kawasaki

    BIO-PROTOCOL   12 ( 19 )   2022年10月

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    担当区分:筆頭著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Bio-Protocol, LLC  

    DOI: 10.21769/bioprotoc.4520

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  • Comparative transcriptome analysis during tuberous stem formation in Kohlrabi (B. oleracea var. gongylodes) at early growth periods (seedling stages). 査読 国際誌

    Md Nuruzzaman, Masato Sato, Satoru Okamoto, Hoque Mozammel, Daniel J Shea, Ryo Fujimoto, Motoki Shimizu, Eigo Fukai, Keiichi Okazaki

    Physiologia plantarum   e13770   2022年8月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Tuberous stem of kohlrabi is an important agronomic trait, however, the molecular basis of tuberization is poorly understood. To elucidate the tuberization mechanism, we conducted a comparative transcriptomic analysis between kohlrabi and broccoli at 10 and 20 days after germination (DAG) as tuberous stem initiated between these time points. A total of 5580 and 2866 differentially expressed transcripts (DETs) were identified between genotypes (kohlrabi vs broccoli) and growth stages (10 DAG vs 20 DAG), respectively, and most of the DETs were down-regulated in kohlrabi. Gene ontology (GO) and KEGG pathway enrichment analyses showed that the DETs between genotypes are involved in cell wall loosening and expansion, cell cycle and division, carbohydrate metabolism, hormone transport, hormone signal transduction, and in several transcription factors. The DETs identified in those categories may directly/indirectly relate to the initiation and development of tuberous stem in kohlrabi. In addition, the expression pattern of the hormone synthesis related DETs coincided with the endogenous IAA, IAAsp, GA, ABA and tZ profiles in kohlrabi and broccoli seedlings, that were revealed in our previous phytohormone analysis. This is the first report on comparative transcriptome analysis for tuberous stem formation in kohlrabi at early growth periods. The resulting data could provide significant insights into the molecular mechanism underlying tuberous stem development in kohlrabi as well as in other tuberous organ forming crops. This article is protected by copyright. All rights reserved.

    DOI: 10.1111/ppl.13770

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  • Altered carbon status in Glycine max hairy roots induced by Agrobacterium rhizogenes 査読

    Satoru Okamoto, Yukiko Ueki

    Plant Signaling & Behavior   2022年6月

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    担当区分:筆頭著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)  

    DOI: 10.1080/15592324.2022.2097469

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  • Long-distance translocation of CLAVATA3/ESR-related 2 peptide and its positive effect on roots sucrose status 査読 国際誌

    Satoru Okamoto, Azusa Kawasaki, Yumiko Makino, Takashi Ishida, Shinichiro Sawa

    Plant Physiology   189 ( 4 )   2357 - 2367   2022年5月

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    担当区分:筆頭著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Oxford University Press (OUP)  

    Abstract

    In vascular plants, roots anchor themselves into the soil and take up water and nutrients to provide them to the shoots. Therefore, continuous growth and development of the roots are important for plant life. To achieve this, photosynthesizing leaves must be able to supply sufficient photoassimilates to the roots. However, the mechanisms by which plants maintain carbon levels in roots remain elusive. Here, we focused on the Arabidopsis (Arabidopsis thaliana) CLAVATA3/ESR-related 2 (CLE2) peptide, which was detected in Arabidopsis xylem exudate, and its homologs. CLE2 and CLE3 genes responded to carbon-deficient conditions. Loss- and gain-of-function mutant analyses showed that CLE genes positively affected root sucrose level. Mutations in the CLE genes resulted in a high shoot/root ratio under sucrose-free conditions. Grafting experiments demonstrated the systemic effect of CLE peptide genes. These findings provide insights into the molecular basis for the relationship between roots and leaves in maintenance of the root sucrose levels and growth.

    DOI: 10.1093/plphys/kiac227

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  • Characterization of Oligopeptides in Solanum lycopersicum Xylem Exudates 査読

    Satoru Okamoto, Azusa Kawasaki, Yumiko Makino

    Life   12 ( 4 )   592 - 592   2022年4月

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    担当区分:筆頭著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:MDPI AG  

    The xylem is the main pathway for the transport of water and molecules from roots to shoots. To date, it has been reported that secreted oligopeptides mediate root-to-shoot signaling, and some long-distance mobile oligopeptides have been detected in xylem exudates. However, the conservation of a number of oligopeptides and the overall features of peptide fragments contained in xylem exudates are poorly understood. Here, we conducted a comprehensive analysis of small proteins and peptides in tomato (Solanum lycopersicum) xylem exudates and characterized the identified peptide fragments. We found that putative secreted proteins were enriched in xylem exudates compared with all proteins in the tomato protein database. We identified seven oligopeptides that showed common features of bioactive oligopeptides, including homologs of CLV3/ESR-related (CLE), C-TERMINALLY ENCODED PEPTIDE (CEP), and CASPARIAN STRIP INTEGRITY FACTOR (CIF) peptides. Furthermore, five of the identified oligopeptides were homologs of the soybean xylem exudate-associated oligopeptides that we previously reported. Our results suggest that oligopeptides in xylem exudates are conserved across plant species and provide insights into not only root-to-shoot signaling but also the maintenance of the xylem conduit.

    DOI: 10.3390/life12040592

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  • Regulation of ammonium acquisition and use in <i>Oryza longistaminata</i> ramets under nitrogen source heterogeneity 査読 国際誌

    Misato Kawai, Ryo Tabata, Miwa Ohashi, Haruno Honda, Takehiro Kamiya, Mikiko Kojima, Yumiko Takebayashi, Shunsuke Oishi, Satoru Okamoto, Takushi Hachiya, Hitoshi Sakakibara

    Plant Physiology   188 ( 4 )   2364 - 2376   2022年3月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Oxford University Press (OUP)  

    Abstract

    Oryza longistaminata, a wild rice, vegetatively reproduces and forms a networked clonal colony consisting of ramets connected by rhizomes. Although water, nutrients, and other molecules can be transferred between ramets via the rhizomes, inter-ramet communication in response to spatially heterogeneous nitrogen availability is not well understood. We studied the response of ramet pairs to heterogeneous nitrogen availability using a split hydroponic system that allowed each ramet root to be exposed to different conditions. Ammonium uptake was compensatively enhanced in the sufficient-side root when roots of the ramet pairs were exposed to ammonium-sufficient and ammonium-deficient conditions. Comparative transcriptome analysis revealed that a gene regulatory network for effective ammonium assimilation and amino acid biosynthesis was activated in the sufficient-side roots. Allocation of absorbed nitrogen from the nitrogen-sufficient to the nitrogen-deficient ramets was rather limited. Nitrogen was preferentially used for newly growing axillary buds on the sufficient-side ramets. Biosynthesis of trans-zeatin (tZ), a cytokinin, was upregulated in response to the nitrogen supply, but tZ appeared not to target the compensatory regulation. Our results also implied that the O. longistaminata putative ortholog of rice (Oryza sativa) C-terminally encoded peptide1 plays a role as a nitrogen-deficient signal in inter-ramet communication, providing compensatory upregulation of nitrogen assimilatory genes. These results provide insights into the molecular basis for efficient growth strategies of asexually proliferating plants growing in areas where the distribution of ammonium ions is spatially heterogeneous.

    DOI: 10.1093/plphys/kiac025

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    その他リンク: https://academic.oup.com/plphys/article-pdf/188/4/2364/43109834/kiac025.pdf

  • Identification of a Male Sterile Candidate Gene in Lilium x formolongi and Transfer of the Gene to Easter Lily (L. longiflorum) via Hybridization. 査読 国際誌

    Takahiro Moriyama, Daniel John Shea, Naoto Yokoi, Seiro Imakiire, Takaaki Saito, Hikaru Ohshima, Hina Saito, Satoru Okamoto, Eigo Fukai, Keiichi Okazaki

    Frontiers in plant science   13   914671 - 914671   2022年

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Pollen-free varieties are advantageous in promoting cut-flower production. In this study, we identified a candidate mutation which is responsible for pollen sterility in a strain of Lilium × formolongi, which was originally identified as a naturally occurred male-sterile plant in a seedling population. The pollen sterility occurred due to the degradation of pollen mother cells (PMCs) before meiotic cell division. Genetic analysis suggested that the male-sterile phenotype is attributed to one recessive locus. Transcriptome comparison between anthers of sterile and fertile plants in a segregated population identified a transcript that was expressed only in pollen-fertile plants, which is homologous to TDF1 (DEFECTIVE in TAPETAL DEVELOPMENT and FUNCTION1) in Arabidopsis, a gene encoding a transcription factor AtMYB35 that is known as a key regulator of pollen development. Since tdf1 mutant shows male sterility, we assumed that the absence transcript of the TDF1-like gene, named as LflTDF1, is the reason for pollen sterility observed in the mutant. A 30 kbp-long nanopore sequence read containing LflTDF1 was obtained from a pollen-fertile accession. PCR analyses using primers designed from the sequence suggested that at least a 30kbp-long region containing LflTDF1 was deleted or replaced by unknown sequence in the pollen-sterile mutant. Since the cross between L. × formolongi and Easter lily (L. longiflorum) is compatible, we successfully introgressed the male-sterile allele, designated as lfltdf1, to Easter lily. To our knowledge, this is the first report of molecular identification of a pollen-sterile candidate gene in lily. The identification and marker development of LflTDF1 gene will assist pollen-free lily breeding of Easter lilies and other lilies.

    DOI: 10.3389/fpls.2022.914671

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  • MIR2111-5 locus and shoot-accumulated mature miR2111 systemically enhance nodulation depending on HAR1 in Lotus japonicus 査読

    Nao Okuma, Takashi Soyano, Takuya Suzaki, Masayoshi Kawaguchi

    Nature Communications   11 ( 1 )   2020年12月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Springer Science and Business Media {LLC}  

    <jats:title>Abstract</jats:title>
    <jats:p>Legumes utilize a shoot-mediated signaling system to maintain a mutualistic relationship with nitrogen-fixing bacteria in root nodules. In <jats:italic>Lotus japonicus</jats:italic>, shoot-to-root transfer of microRNA miR2111 that targets <jats:italic>TOO MUCH LOVE</jats:italic>, a nodulation suppressor in roots, has been proposed to explain the mechanism underlying nodulation control from shoots. However, the role of shoot-accumulating miR2111s for the systemic regulation of nodulation was not clearly shown. Here, we find <jats:italic>L. japonicus</jats:italic> has seven miR2111 loci, including those mapped through RNA-seq. <jats:italic>MIR2111-5</jats:italic> expression in leaves is the highest among miR2111 loci and repressed after rhizobial infection depending on a shoot-acting HYPERNODULATION ABERRANT ROOT FORMATION1 (HAR1) receptor. <jats:italic>MIR2111-5</jats:italic> knockout mutants show significantly decreased nodule numbers and miR2111 levels. Furthermore, grafting experiments using transformants demonstrate scions with altered miR2111 levels influence nodule numbers in rootstocks in a dose-dependent manner. Therefore, miR2111 accumulation in leaves through <jats:italic>MIR2111-5</jats:italic> expression is required for HAR1-dependent systemic optimization of nodule number.</jats:p>

    DOI: 10.1038/s41467-020-19037-9

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  • CLE-HAR1 Systemic Signaling and NIN-Mediated Local Signaling Suppress the Increased Rhizobial Infection in the <i>daphne</i> Mutant of <i>Lotus japonicus</i> 査読

    Emiko Yoro, Takuya Suzaki, Masayoshi Kawaguchi

    Molecular Plant-Microbe Interactions®   33 ( 2 )   320 - 327   2020年2月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Scientific Societies  

    <jats:p> Legumes survive in nitrogen-limited soil by forming a symbiosis with rhizobial bacteria. During root nodule symbiosis, legumes strictly control the development of their symbiotic organs, the nodules, in a process known as autoregulation of nodulation (AON). The study of hypernodulation mutants has elucidated the molecular basis of AON. Some hypernodulation mutants show an increase in rhizobial infection in addition to developmental alteration. However, the relationship between the AON and the regulation of rhizobial infection has not been clarified. We previously isolated daphne, a nodule inception (nin) allelic mutant, in Lotus japonicus. This mutant displayed dramatically increased rhizobial infection, suggesting the existence of NIN-mediated negative regulation of rhizobial infection. Here, we investigated whether the previously isolated components of AON, especially CLAVATA3/ESR (CLE)-RELATED-ROOT SIGNAL1 (CLE-RS1), CLE-RS2, and their putative receptor HYPERNODULATION AND ABERRANT ROOT FORMATION1 (HAR1), were able to suppress increased infection in the daphne mutant. The constitutive expression of LjCLE-RS1/2 strongly reduced the infection in the daphne mutant in a HAR1-dependent manner. Moreover, reciprocal grafting analysis showed that strong reduction of infection in daphne rootstock constitutively expressing LjCLE-RS1 was canceled by a scion of the har1 or klavier mutant, the genes responsible for encoding putative LjCLE-RS1 receptors. These data indicate that rhizobial infection is also systemically regulated by CLE-HAR1 signaling, a component of AON. In addition, the constitutive expression of NIN in daphne har1 double-mutant roots only partially reduced the rhizobial infection. Our findings indicate that the previously identified NIN-mediated negative regulation of infection involves unknown local signaling, as well as CLE-HAR1 long-distance signaling. </jats:p>

    DOI: 10.1094/mpmi-08-19-0223-r

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  • PLENTY, a hydroxyprolineO-arabinosyltransferase, negatively regulates root nodule symbiosis inLotus japonicus 査読

    Emiko Yoro, Hanna Nishida, Mari Ogawa-Ohnishi, Chie Yoshida, Takuya Suzaki, Yoshikatsu Matsubayashi, Masayoshi Kawaguchi

    Journal of Experimental Botany   70 ( 2 )   507 - 517   2019年1月

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    掲載種別:研究論文(学術雑誌)   出版者・発行元:Oxford University Press (OUP)  

    DOI: 10.1093/jxb/ery364

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  • LACK OF SYMBIONT ACCOMMODATION controls intracellular symbiont accommodation in root nodule and arbuscular mycorrhizal symbiosis in Lotus japonicus 査読

    Takuya Suzaki, Martin Parniske, Naoya Takeda, Hanna Nishida, Motomi Hoshino, Momoyo Ito, Fumika Misawa, Yoshihiro Handa, Kenji Miura, Masayoshi Kawaguchi

    PLOS Genetics   15 ( 1 )   e1007865   2019年1月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:Public Library of Science ({PLoS})  

    Nitrogen-fixing rhizobia and arbuscular mycorrhizal fungi (AMF) form symbioses with plant roots and these are established by precise regulation of symbiont accommodation within host plant cells. In model legumes such as Lotus japonicus and Medicago truncatula, rhizobia enter into roots through an intracellular invasion system that depends on the formation of a root-hair infection thread (IT). While IT-mediated intracellular rhizobia invasion is thought to be the most evolutionarily derived invasion system, some studies have indicated that a basal intercellular invasion system can replace it when some nodulation-related factors are genetically modified. In addition, intracellular rhizobia accommodation is suggested to have a similar mechanism as AMF accommodation. Nevertheless, our understanding of the underlying genetic mechanisms is incomplete. Here we identify a L. japonicus nodulation-deficient mutant, with a mutation in the LACK OF SYMBIONT ACCOMMODATION (LAN) gene, in which root-hair IT formation is strongly reduced, but intercellular rhizobial invasion eventually results in functional nodule formation. LjLAN encodes a protein that is homologous to Arabidopsis MEDIATOR 2/29/32

    DOI: 10.1371/journal.pgen.1007865

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  • Nitrate-mediated control of root nodule symbiosis 査読

    Nishida, Hanna, Suzaki, Takuya

    Current opinion in plant biology   44   129 - 136   2018年8月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:CURRENT BIOLOGY LTD  

    Nitrogen is an indispensable inorganic nutrient that is required by plants throughout their life. Root nodule symbiosis (RNS) is an important strategy mainly adopted by legumes to enhance nitrogen acquisition, where several key processes required for the establishment of the symbiosis, are pleiotropically controlled by nitrate availability in soil. Although the autoregulation of nodulation (AON), a systemic long-range signaling, has been suggested to be implicated in nitrate-induced control of RNS, AON alone is insufficient to fully explain the pleiotropic regulation that is induced by nitrate. A recent elucidation of the function of a NIN-LIKE PROTEIN transcription factor has provided greater insights into the genetic mechanisms underlying nitrate-induced control of RNS in varying nitrate environments.

    DOI: 10.1016/j.pbi.2018.04.006

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  • Long-distance peptide signaling essential for nutrient homeostasis in plants 査読

    Satoru Okamoto, Ryo Tabata, Yoshikatsu Matsubayashi

    CURRENT OPINION IN PLANT BIOLOGY   34   35 - 40   2016年12月

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    担当区分:筆頭著者   記述言語:英語   出版者・発行元:CURRENT BIOLOGY LTD  

    Organ-to-organ communication is indispensable for higher organisms to maintain homeostasis over their entire life. Recent findings have uncovered that plants, like animals, mediate organ-to-organ communication by long-distance signaling through the vascular system. In particular, xylem-mobile secreted peptides have attracted much attention as root-to shoot long-distance signaling molecules in response to fluctuating environmental nutrient status. Several leguminous CLE peptides induced by rhizobial inoculation act as 'satiety' signals in long-distance negative feedback of nodule formation. By contrast, Arabidopsis CEP family peptides induced by local nitrogen (N)-starvation behave as systemic 'hunger' signals to promote compensatory N acquisition in other parts of the roots. Xylem sap peptidomics also implies the presence of still uncharacterized long-distance signaling peptides. This review highlights the current understanding of and new insights into the mechanisms and functions of root-to-shoot long-distance peptide signaling during environmental responses.

    DOI: 10.1016/j.pbi.2016.07.009

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  • A comprehensive strategy for identifying long-distance mobile peptides in xylem sap 査読

    Satoru Okamoto, Takamasa Suzuki, Masayoshi Kawaguchi, Tetsuya Higashiyama, Yoshikatsu Matsubayashi

    PLANT JOURNAL   84 ( 3 )   611 - 620   2015年11月

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    担当区分:筆頭著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:WILEY  

    There is a growing awareness that secreted peptides mediate organ-to-organ communication in higher plants. Xylem sap peptidomics is an effective but challenging approach for identifying long-distance mobile peptides. In this study we developed a simple, gel-free purification system that combines o-chlorophenol extraction with HPLC separation. Using this system, we successfully identified seven oligopeptides from soybean xylem sap exudate that had one or more post-transcriptional modifications: glycosylation, sulfation and/or hydroxylation. RNA sequencing and quantitative PCR analyses showed that the peptide-encoding genes are expressed in multiple tissues. We further analyzed the long-distance translocation of four of the seven peptides using gene-encoding peptides with single amino acid substitutions, and identified these four peptides as potential root-to-shoot mobile oligopeptides. Promoter-GUS analysis showed that all four peptide-encoding genes were expressed in the inner tissues of the root endodermis. Moreover, we found that some of these peptide-encoding genes responded to biotic and/or abiotic factors. These results indicate that our purification system provides a comprehensive approach for effectively identifying endogenous small peptides and reinforce the concept that higher plants employ various peptides in root-to-shoot signaling.

    DOI: 10.1111/tpj.13015

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  • Shoot HAR1 mediates nitrate inhibition of nodulation in Lotus japonicus 査読

    Satoru Okamoto, Masayoshi Kawaguchi

    PLANT SIGNALING & BEHAVIOR   10 ( 5 )   e1000138   2015年5月

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    担当区分:筆頭著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:TAYLOR & FRANCIS INC  

    Nitrate is a major environmental factor in the inhibition of nodulation. In a model legume Lotus japonicus, a CLV1-like receptor kinase, HAR1, mediates nitrate inhibition and autoregulation of nodulation. Autoregulation of nodulation involves root-to-shoot-to-root long-distance communication, and HAR1 functions in shoots. However, it remains elusive where HAR1 functions in the nitrate inhibition of nodulation. We performed grafting experiments with the har1 mutant under various nitrate conditions, and found that shoot HAR1 is critical for the inhibition of nodulation at 10mM nitrate. Combined with our recent finding that the nitrate-induced CLE-RS2 glycopeptide binds directly to the HAR1 receptor, this result suggests that CLE-RS2/HAR1 long-distance signaling plays an important role in the both nitrate inhibition and the autoregulation of nodulation.

    DOI: 10.1080/15592324.2014.1000138

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  • Dynamics of long-distance signaling via plant vascular tissues 査読

    Michitaka Notaguchi, Satoru Okamoto

    FRONTIERS IN PLANT SCIENCE   6   161   2015年3月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:FRONTIERS RESEARCH FOUNDATION  

    Plant vascular systems are constructed by specific cell wall modifications through which cells are highly specialized to make conduits for water and nutrients. Xylem vessels are formed by thickened cell walls that remain after programmed cell death, and serve as water conduits from the root to the shoot. In contrast, phloem tissues consist of a complex of living cells, including sieve tube elements and their neighboring companion cells, and translocate photosynthetic assimilates from mature leaves to developing young tissues. Intensive studies on the content of vascular flow fluids have unveiled that plant vascular tissues transport various types of gene product, and the transport of some provides the molecular basis for the long-distance communications. Analysis of xylem sap has demonstrated the presence of proteins in the xylem transpiration stream. Recent studies have revealed that CLE and CEP peptides secreted in the roots are transported to above ground via the xylem in response to plant-microbe interaction and soil nitrogen starvation, respectively. Their leucine-rich repeat transmembrane receptors localized in the shoot phloem are required for relaying the signal from the shoot to the root. These findings well fit to the current scenario of root-to-shoot-to-root feedback signaling, where peptide transport achieves the root-to-shoot signaling, the first half of the signaling process. Meanwhile, it is now well-evidenced that proteins and a range of RNAs are transported via the phloem translocation system, and some of those can exert their physiological functions at their destinations, including roots. Thus, plant vascular systems may serve not only as conduits for the translocation of essential substances but also as long-distance communication pathways that allow plants to adapt to changes in internal and external environments at the whole plant level.

    DOI: 10.3389/fpls.2015.00161

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  • Root-derived CLE glycopeptides control nodulation by direct binding to HAR1 receptor kinase 査読

    Satoru Okamoto, Hidefumi Shinohara, Tomoko Mori, Yoshikatsu Matsubayashi, Masayoshi Kawaguchi

    NATURE COMMUNICATIONS   4   2191   2013年8月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:NATURE PUBLISHING GROUP  

    Leguminous plants establish a symbiosis with rhizobia to enable nitrogen fixation in root nodules under the control of the presumed root-to-shoot-to-root negative feedback called autoregulation of nodulation. In Lotus japonicus, autoregulation is mediated by CLE-RS genes that are specifically expressed in the root, and the receptor kinase HAR1 that functions in the shoot. However, the mature functional structures of CLE-RS gene products and the molecular nature of CLE-RS/HAR1 signalling governed by these spatially distant components remain elusive. Here we show that CLE-RS2 is a post-translationally arabinosylated glycopeptide derived from the CLE domain. Chemically synthesized CLE-RS glycopeptides cause significant suppression of nodulation and directly bind to HAR1 in an arabinose-chain and sequence-dependent manner. In addition, CLE-RS2 glycopeptide specifically produced in the root is found in xylem sap collected from the shoot. We propose that CLE-RS glycopeptides are the long sought mobile signals responsible for the initial step of autoregulation of nodulation.

    DOI: 10.1038/ncomms3191

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  • Hairy Root Transformation in Lotus japonicus 査読

    Okamoto S, Yoro E, Suzaki T, Kawaguchi M

    bio-protocol   3   e795   2013年6月

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    担当区分:筆頭著者   記述言語:英語  

    DOI: 10.21769/BioProtoc.795

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  • TOO MUCH LOVE, a novel kelch repeat-containing F-box protein, functions in the long-distance regulation of the LEGUME-rhizobium symbiosis 査読

    Masahiro Takahara, Shimpei Magori, Takashi Soyano, Satoru Okamoto, Chie Yoshida, Koji Yano, Shusei Sato, Satoshi Tabata, Katsushi Yamaguchi, Shuji Shigenobu, Naoya Takeda, Takuya Suzaki, Masayoshi Kawaguchi

    Plant and Cell Physiology   54 ( 4 )   433 - 447   2013年4月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)  

    The interaction of legumes with N2-fixing bacteria collectively called rhizobia results in root nodule development. The number of nodules formed is tightly restricted through the systemic negative feedback control by the host called autoregulation of nodulation (AON). Here, we report the characterization and gene identification of TOO MUCH LOVE (TML), a root factor that acts during AON in a model legume Lotus japonicus. In our genetic analyses using another root-regulated hypernodulation mutant, plenty, the tml-1 plenty double mutant showed additive effects on the nodule number, whereas the tml-1 har1-7 double mutant did not, suggesting that TML and PLENTY act in different genetic pathways and that TML and HAR1 act in the same genetic pathway. The systemic suppression of nodule formation by CLE-RS1/RS2 overexpression was not observed in the tml mutant background, indicating that TML acts downstream of CLE-RS1/RS2. The tml-1 Snf2 double mutant developed an excessive number of spontaneous nodules, indicating that TML inhibits nodule organogenesis. Together with the determination of the deleted regions in tml-1/-2/-3, the fine mapping of tml-4 and the next-generation sequencing analysis, we identified a nonsense mutation in the Kelch repeat-containing F-box protein. As the gene knockdown of the candidate drastically increased the number of nodules, we concluded that it should be the causative gene. An expression analysis revealed that TML is a root-specific gene. In addition, the activity of ProTML-GUS was constitutively detected in the root tip and in the nodules/nodule primordia upon rhizobial infection. In conclusion, TML is a root factor acting at the final stage of AON. © 2013 The Author 2013. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For permissions, please email: journals.permissions@oup.com.

    DOI: 10.1093/pcp/pct022

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  • Expression and Functional Analysis of a CLV3-Like Gene in the Model Legume Lotus japonicus 査読

    Satoru Okamoto, Tomomi Nakagawa, Masayoshi Kawaguchi

    PLANT AND CELL PHYSIOLOGY   52 ( 7 )   1211 - 1221   2011年7月

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    担当区分:筆頭著者, 責任著者   記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:OXFORD UNIV PRESS  

    Plant aerial parts are differentiated from stem cells that are located in the shoot apical meristem (SAM). CLAVATA3 (CLV3)-CLV1 is a well-known ligand-receptor pair, which functions in SAM maintenance. In Lotus japonicus, HYPERNODULATION ABERRANT ROOT FORMATION1 (HAR1) shows the highest similarity with CLV1 of all Arabidopsis receptor-like kinases (RLKs). However, HAR1 functions in the systemic regulation of root nodule development, but does not appear to function in SAM maintenance. Therefore, the gene that is responsible for SAM maintenance in L. japonicus is largely unknown. Here, we identified the L. japonicus CLV3-like (LjCLV3) gene as a counterpart of AtCLV3 and performed expression and functional analysis. LjCLV3 transcripts were detected in the central region of the shoot meristems. However, unlike AtCLV3, LjCLV3 expression was not detected in the epidermal layer, but in the inner layers of the shoot meristems. RNA interference (RNAi) of LjCLV3 caused enlargement of not only the SAM, but also the primary and secondary inflorescence meristems (IMs). Furthermore, LjCLV3-silenced plants exhibited fasciated stems and an increased number of flowers per peduncle. These results reveal that LjCLV3 is responsible for the maintenance of the SAM as well as the primary and secondary IMs.

    DOI: 10.1093/pcp/pcr071

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  • The Clavata2 genes of pea and Lotus japonicus affect autoregulation of nodulation 査読

    Lene Krusell, Naoto Sato, Izumi Fukuhara, Bjorn E. V. Koch, Christina Grossmann, Satoru Okamoto, Erika Oka-Kira, Yoko Otsubo, Gregoire Aubert, Tomomi Nakagawa, Shusei Sato, Satoshi Tabata, Gerard Duc, Martin Parniske, Trevor L. Wang, Masayoshi Kawaguchi, Jens Stougaard

    PLANT JOURNAL   65 ( 6 )   861 - 871   2011年3月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:WILEY-BLACKWELL  

    The number of root nodules developing on legume roots after rhizobial infection is controlled by the plant shoot through autoregulation and mutational inactivation of this mechanism leads to hypernodulation. We have characterised the Pisum sativum (pea) Sym28 locus involved in autoregulation and shown that it encodes a protein similar to the Arabidopsis CLAVATA2 (CLV2) protein. Inactivation of the PsClv2 gene in four independent sym28 mutant alleles, carrying premature stop codons, results in hypernodulation of the root and changes to the shoot architecture. In the reproductive phase sym28 shoots develops additional flowers, the stem fasciates, and the normal phyllotaxis is perturbed. Mutational substitution of an amino acid in one leucine rich repeat of the corresponding Lotus japonicus LjCLV2 protein results in increased nodulation. Similarly, down-regulation of the Lotus Clv2 gene by RNAi mediated reduction of the transcript level also resulted in increased nodulation. Gene expression analysis of LjClv2 and Lotus hypernodulation aberrant root formation Har1 (previously shown to regulate nodule numbers) indicated they have overlapping organ expression patterns. However, we were unable to demonstrate a direct protein-protein interaction between LjCLV2 and LjHAR1 proteins in contrast to the situation between equivalent proteins in Arabidopsis. LjHAR1 was localised to the plasma membrane using a YFP fusion whereas LjCLV2-YFP localised to the endoplasmic reticulum when transiently expressed in Nicotiana benthamiana leaves. This finding is the most likely explanation for the lack of interaction between these two proteins.

    DOI: 10.1111/j.1365-313X.2010.04474.x

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  • Nod factor/nitrate-induced CLE genes that drive HAR1-mediated systemic regulation of nodulation. 査読

    Satoru Okamoto, Erika Ohnishi, Shusei Sato, Hirokazu Takahashi, Mikio Nakazono, Satoshi Tabata, Masayoshi Kawaguchi

    Plant & cell physiology   50 ( 1 )   67 - 77   2009年1月

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    担当区分:筆頭著者   記述言語:英語   掲載種別:研究論文(学術雑誌)  

    Host legumes control root nodule numbers by sensing external and internal cues. A major external cue is soil nitrate, whereas a feedback regulatory system in which earlier formed nodules suppress further nodulation through shoot-root communication is an important internal cue. The latter is known as autoregulation of nodulation (AUT), and is believed to consist of two long-distance signals: a root-derived signal that is generated in infected roots and transmitted to the shoot; and a shoot-derived signal that systemically inhibits nodulation. In Lotus japonicus, the leucine-rich repeat receptor-like kinase, HYPERNODULATION ABERRANT ROOT FORMATION 1 (HAR1), mediates AUT and nitrate inhibition of nodulation, and is hypothesized to recognize the root-derived signal. Here we identify L. japonicus CLE-Root Signal 1 (LjCLE-RS1) and LjCLE-RS2 as strong candidates for the root-derived signal. A hairy root transformation study shows that overexpressing LjCLE-RS1 and -RS2 inhibits nodulation systemically and, furthermore, that the systemic suppression depends on HAR1. Moreover, LjCLE-RS2 expression is strongly up-regulated in roots by nitrate addition. Based on these findings, we propose a simple model for AUT and nitrate inhibition of nodulation mediated by LjCLE-RS1, -RS2 peptides and the HAR1 receptor-like kinase.

    DOI: 10.1093/pcp/pcn194

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  • Expression of LjENOD40 genes in response to symbiotic and non-symbiotic signals: LjENOD40-1 and LjENOD40-2 are differentially regulated in lotus japonicus 査読

    N Takeda, S Okamoto, M Hayashi, Y Murooka

    PLANT AND CELL PHYSIOLOGY   46 ( 8 )   1291 - 1298   2005年8月

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    記述言語:英語   掲載種別:研究論文(学術雑誌)   出版者・発行元:OXFORD UNIV PRESS  

    Nitrogen fixation in nodules provides leguminous plants with an ability to grow in nitrogen-starved soil. Infection of the host plants by microsymbionts triggers various physiological and morphological changes during nodule formation. In Lotus japonicus, expression of early nodulin (ENOD) genes is triggered by perception of bacterial signal molecules, nodulation factors (Nod factors). We examined the expression patterns of ENOD40 genes during the nodule formation process. Two ENOD40 genes of L. japonicus were specifically expressed in the nodule formation process, but they showed different expression patterns upon infection. Each ENOD40 gene demonstrates an individual specificity and regulation with regard to rhizobial infection.

    DOI: 10.1093/pcp/pci138

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書籍等出版物

  • 植物のシグナル伝達

    岡本 暁( 担当: 分担執筆 ,  範囲: 根粒形成のシステミックな抑制をひき起こす誘導性CLE遺伝子)

    共立出版  2010年5月 

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MISC

  • P083 ダイズ道管液における長距離移行性ペプチドの探索(ポスター発表,植物化学調節学会第50回大会)

    岡本 暁, 鈴木 孝征, 川口 正代司, 東山 哲也, 松林 嘉克

    植物化学調節学会研究発表記録集   50   101 - 101   2015年10月

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    記述言語:日本語   出版者・発行元:植物化学調節学会  

    CiNii Article

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  • 81. 導管を介して長距離移行する分泌型ペプチドの探索(口頭発表,植物化学調節学会第49回大会)

    岡本 暁, 鈴木 孝征, 東山 哲也, 松林 嘉克

    植物化学調節学会研究発表記録集   49   99 - 99   2014年10月

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    記述言語:日本語   出版者・発行元:植物化学調節学会  

    CiNii Article

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  • 81. CLEペプチド-HAR1受容体シグナル伝達を介した根粒形成の遠距離制御(口頭発表,植物化学調節学会第48回大会)

    岡本 暁, 篠原 秀文, 森 友子, 松林 嘉克, 川口 正代司

    植物化学調節学会研究発表記録集   48   96 - 96   2013年10月

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    記述言語:日本語   出版者・発行元:植物化学調節学会  

    CiNii Article

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  • Functional analysis of CLAVATA2, CLAVATA3 like genes in Lotus japonicus

    Satoru Okamoto, Naoto Satou, Erika Kira, Tomomi Nakagawa, Izumi Hukuhara, Syusei Satou, Satoshi Tabata, Perry Jillian, Wang Trevor, Masayoshi Kawaguchi

    PLANT AND CELL PHYSIOLOGY   48   S193 - S193   2007年

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    記述言語:英語   掲載種別:研究発表ペーパー・要旨(国際会議)   出版者・発行元:OXFORD UNIV PRESS  

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  • Lotus japonicus CLAVATA2 negatively regulates nodulation

    SATO Naoto, OKAMOTO Satoru, OKA KIRA Erika, FUKUHARA Izumi, OHTSUBO Yoko, NAKAGAWA Tomomi, SATO Shusei, TABATA Satoshi, PERRY Jillian, WANG Trevor, KAWAGUCHI Masayoshi

    Journal of plant research   119   147 - 148   2006年12月

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  • Identification of antisense RNA from LjENOD40

    S Okamoto, Y Murooka, M Hayashi

    PLANT AND CELL PHYSIOLOGY   46   S122 - S122   2005年

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    記述言語:英語   掲載種別:研究発表ペーパー・要旨(国際会議)   出版者・発行元:OXFORD UNIV PRESS  

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講演・口頭発表等

  • 根の成長とスクロース含量の維持に関わる長距離移行性ペプチド

    岡本暁, 川崎梓, 牧野由美子, 石田喬志, 澤進一郎

    第62回日本植物生理学会年会  2021年3月 

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    記述言語:英語   会議種別:シンポジウム・ワークショップ パネル(指名)  

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  • A study of root-to-shoot long-distance mobile peptides 招待

    Satoru Okamoto

    International Workshop on Plant Nutritional Responses 2019  2019年12月 

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    開催年月日: 2019年12月

    記述言語:英語   会議種別:口頭発表(招待・特別)  

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  • ペプチドを介した根から地上部への長距離コミュニケーション 招待

    岡本暁

    第60回新潟生化学懇話会  2019年7月 

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    開催年月日: 2019年7月

    記述言語:日本語   会議種別:口頭発表(招待・特別)  

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  • 道管液中の低分子タンパク・ペプチドの網羅的な解析

    岡本暁, 牧野由美子

    日本作物学会第247回講演会  2019年3月 

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    開催年月日: 2019年3月

    記述言語:日本語   会議種別:ポスター発表  

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  • 異なる栄養環境における道管液中の低分子タンパク・ペプチドの網羅的な解析

    岡本暁, 小堀峻吾, 熊石妃恵, 牧野由美子, 鈴木孝征, 市橋泰範

    第60回日本植物生理学会年会  2019年3月 

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    開催年月日: 2019年3月

    会議種別:ポスター発表  

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  • 異なる窒素栄養条件に応答したOryza longistaminataの地下茎を介したラメット間情報輸送に関する研究

    河合美里, 本田遥乃, 岡本暁, 大橋美和, 榊原均

    第60回日本植物生理学会年会  2019年3月 

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    開催年月日: 2019年3月

    記述言語:日本語   会議種別:ポスター発表  

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  • 野生イネOryza longistaminataの窒素栄養応答における地上茎間の相互作用の解析

    岡本暁, Stefan Reuscher, 鈴木孝征, 小島美紀子, 竹林裕美子, 芦刈基行, 榊原均

    第60回日本植物生理学会年会  2017年3月 

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    開催年月日: 2017年3月

    記述言語:日本語   会議種別:ポスター発表  

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  • Long-distance mobile peptides in xylem sap

    Satoru Okamoto, Takamasa Suzuki, Masayoshi Kawaguchi, Tetsuya Higashiyama, Yoshikatsu Matsubayashi

    CSHA meeting on Latest Advances in Plant Development & Environmental Response  2016年11月 

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    開催年月日: 2016年11月 - 2016年12月

    記述言語:英語   会議種別:ポスター発表  

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  • ダイズ道管液における長距離移行性ペプチドの探索

    岡本暁, 鈴木孝征, 川口正代司, 東山哲也, 松林嘉克

    第57回日本植物生理学会年会  2016年3月 

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    開催年月日: 2016年3月

    記述言語:日本語   会議種別:ポスター発表  

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  • ダイズ道管液における長距離移行性ペプチドの探索

    岡本暁, 鈴木孝征, 川口正代司, 東山哲也, 松林嘉克

    植物化学調節学会第50 回大会  2015年10月 

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    開催年月日: 2015年10月

    記述言語:日本語   会議種別:ポスター発表  

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  • Long-distance mobile peptides in xylem sap

    Satoru Okamoto, Takamasa Suzuki, Masayoshi Kawaguchi, Tetsuya Higashiyama, Yoshikatsu Matsubayashi

    3rd European workshop on plant peptide signalling and activity  2015年9月 

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    開催年月日: 2015年9月

    記述言語:英語   会議種別:口頭発表(一般)  

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受賞

  • Fellowship Award

    2016年12月   Cold Spring Harbor Asia  

    岡本 暁

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  • 優秀発表賞

    2015年10月   植物化学調節学会  

    岡本 暁

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  • PCP論文賞

    2011年7月   日本植物生理学会  

    岡本 暁

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共同研究・競争的資金等の研究

  • 共生を支える超階層システミックシグナリングとメタボロミクス

    研究課題/領域番号:23H00381

    2023年4月 - 2027年3月

    制度名:科学研究費助成事業

    研究種目:基盤研究(A)

    提供機関:日本学術振興会

    川口 正代司, 岡本 暁, 川出 健介

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    配分額:47060000円 ( 直接経費:36200000円 、 間接経費:10860000円 )

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  • ペプチドを介して根から葉に対して光合成産物を要求するシグナル伝達機構の研究

    研究課題/領域番号:22K06277

    2022年4月 - 2025年3月

    制度名:科学研究費助成事業

    研究種目:基盤研究(C)

    提供機関:日本学術振興会

    岡本 暁

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    配分額:4160000円 ( 直接経費:3200000円 、 間接経費:960000円 )

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  • 光合成産物の欠乏に応答する長距離移行性ペプチドを介したシグナル伝達機構の研究

    研究課題/領域番号:17K15137

    2017年4月 - 2020年3月

    制度名:科学研究費助成事業

    研究種目:若手研究(B)

    提供機関:日本学術振興会

    岡本 暁

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    配分額:4550000円 ( 直接経費:3500000円 、 間接経費:1050000円 )

    光合成器官である成熟葉から根や子実などへの光合成産物の分配は植物個体の成長や作物の収量形成を考える上で重要である。研究代表者はこれまでにシロイヌナズナの根において光合成産物の欠乏に応答するペプチドAXLを見出しており、過剰発現体とノックアウト系統を用いた解析からAXLは根におけるスクロースの増加を引き起こすことを見出している。しかしながら、AXLペプチドがどのように根のスクロース含量の増加に関与するかは不明である。そこで本研究ではAXLの下流で機能する因子を探索した。その結果、AXLはスクロース輸送体SUC2の活性を制御することで根へのスクロースの転流を制御することが示唆された。

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  • 炭素源の欠乏に関連して発現誘導される長距離移行性分泌型ペプチドの機能解析

    2015年4月 - 2017年3月

    制度名:若手研究B

    提供機関:日本学術振興会

    岡本 暁

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    担当区分:研究代表者  資金種別:競争的資金

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  • 高等植物における分泌型ペプチドの器官間・細胞間移行の解析

    2012年4月 - 2015年3月

    制度名:特別研究員奨励費

    提供機関:日本学術振興会

    岡本 暁

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    担当区分:研究代表者  資金種別:競争的資金

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担当経験のある授業科目(researchmap)

  • 作物生理学

    2019年6月
    -
    現在
    機関名:新潟大学

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担当経験のある授業科目

  • 農業資源を知る

    2024年
    -
    現在
    機関名:新潟大学

  • 作物分子生物学

    2024年
    -
    現在
    機関名:新潟大学

  • 生物資源科学演習I

    2023年
    機関名:新潟大学

  • 科学英語演習

    2023年
    機関名:新潟大学

  • 卒業論文II

    2023年
    機関名:新潟大学

  • 学科インターンシップ

    2023年
    機関名:新潟大学

  • 卒業論文I

    2023年
    機関名:新潟大学

  • 作物生理学特論

    2023年
    機関名:新潟大学

  • 生物資源科学演習II

    2023年
    機関名:新潟大学

  • 作物生理学

    2022年
    -
    現在
    機関名:新潟大学

  • 作物学II

    2021年
    -
    2022年
    機関名:新潟大学

  • 植物生産学演習I

    2021年
    機関名:新潟大学

  • 作物学概論

    2021年
    機関名:新潟大学

  • 植物生産学実験実習Ⅲ

    2020年
    -
    現在
    機関名:新潟大学

  • 植物生産学実験実習Ⅳ

    2020年
    -
    現在
    機関名:新潟大学

  • 農学入門Ⅰ

    2020年
    機関名:新潟大学

  • 農学入門Ⅱ

    2020年
    機関名:新潟大学

  • 植物生産実地見学

    2019年
    -
    現在
    機関名:新潟大学

  • 植物生産学実験実習Ⅱ

    2019年
    -
    現在
    機関名:新潟大学

  • 植物生産学演習Ⅱ

    2019年
    -
    2021年
    機関名:新潟大学

  • 作物学Ⅰ

    2019年
    -
    2021年
    機関名:新潟大学

  • 植物生産学実験実習Ⅰ

    2018年
    -
    現在
    機関名:新潟大学

▶ 全件表示