Updated on 2024/12/21

写真a

 
OSAKA Jiro
 
Organization
Brain Research Institute Center for Bioresources Specially Appointed Assistant Professor
Title
Specially Appointed Assistant Professor
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Degree

  • 博士(理学) ( 2023.3 )

  • 修士(理学) ( 2020.3 )

  • 学士(理学) ( 2018.3 )

Research History (researchmap)

  • 日本学術振興会特別研究員PD

    2024.4

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  • Niigata University   Brain Research Institute   Specially Appointed Assistant Professor

    2023.4

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  • Japan Society for the Promotion of Science

    2021.4 - 2023.3

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Research History

  • Niigata University   Center for Bioresources, Brain Research Institute   Specially Appointed Assistant Professor

    2023.4

Education

  • Tokyo Institute of Technology   School of Life Science and Technology   生命理工学系生命理工学コース

    2020.4 - 2023.3

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    Notes: 博士課程

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  • Tokyo Institute of Technology   School of Life Science and Technology   生命理工学系生命理工学コース

    2018.4 - 2020.3

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    Notes: 修士課程

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  • Tokyo Institute of Technology   School of Bioscience and Biotechnology   生命工学科生命情報コース

    2014.4 - 2018.3

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Papers

  • Drosophila model to clarify the pathological significance of OPA1 in autosomal dominant optic atrophy

    Yohei Nitta, Jiro Osaka, Ryuto Maki, Satoko Hakeda-Suzuki, Emiko Suzuki, Satoshi Ueki, Takashi Suzuki, Atsushi Sugie

    eLife   12   2024.8

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    Authorship:Lead author   Publishing type:Research paper (scientific journal)   Publisher:eLife Sciences Publications, Ltd  

    Autosomal dominant optic atrophy (DOA) is a progressive form of blindness caused by degeneration of retinal ganglion cells and their axons, mainly caused by mutations in the OPA1 mitochondrial dynamin like GTPase (OPA1) gene. OPA1 encodes a dynamin-like GTPase present in the mitochondrial inner membrane. When associated with OPA1 mutations, DOA can present not only ocular symptoms but also multi-organ symptoms (DOA plus). DOA plus often results from point mutations in the GTPase domain, which are assumed to have dominant-negative effects. However, the presence of mutations in the GTPase domain does not always result in DOA plus. Therefore, an experimental system to distinguish between DOA and DOA plus is needed. In this study, we found that loss-of-function mutations of the dOPA1 gene in Drosophila can imitate the pathology of optic nerve degeneration observed in DOA. We successfully rescued this degeneration by expressing the human OPA1 (hOPA1) gene, indicating that hOPA1 is functionally interchangeable with dOPA1 in the fly system. However, mutations previously identified did not ameliorate the dOPA1 deficiency phenotype. By expressing both WT and DOA plus mutant hOPA1 forms in the optic nerve of dOPA1 mutants, we observed that DOA plus mutations suppressed the rescue, facilitating the distinction between loss-of-function and dominant-negative mutations in hOPA1. This fly model aids in distinguishing DOA from DOA plus and guides initial hOPA1 mutation treatment strategies.

    DOI: 10.7554/elife.87880.3

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    Other Link: https://cdn.elifesciences.org/articles/87880/elife-87880-v1.xml

  • Complex Formation of Immunoglobulin Superfamily Molecules Side-IV and Beat-IIb Regulates Synaptic Specificity International journal

    Jiro Osaka, Arisa Ishii, Xu Wang, Riku Iwanaga, Hinata Kawamura, Atsushi Sugie, Satoko Hakeda-Suzuki, Takashi Suzuki

    Cell reports   43 ( 2 )   113798 - 113798   2024

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Elsevier BV  

    <jats:title>SUMMARY</jats:title><jats:p>Neurons express many cell surface proteins as mutually binding “key-lock molecules” that can create synapses. However, the molecular mechanisms of how neurons make synapses only with preferred targets are not completely understood. Here we identified Side-IV and Beat-IIb, belonging to the<jats:italic>Drosophila</jats:italic>immunoglobulin superfamily, as a new key-lock combination capable of inducing synapse formation. Side-IV interaction with Beat-IIb transduces bifurcated signaling to Side-IV’s co-receptor, Kirre, and a synaptic scaffold protein, Dsyd-1. Localization and genetic interaction analyses revealed that Side-IV localizes subcellularly at synapse formations defined by Beat-IIa/b and anchors Dsyd-1. Our data demonstrate that a complex made up of Side-IV, Beat-IIb, Kirre, and Dsyd-1 not only narrows neuronal binding specificity but also recruits synapse formation factors Kirre and Dsyd-1 to restrict synapse formation loci and inhibit miswiring. We propose a mechanism by which key-lock molecules set a hierarchy of preference among neuronal pairs in a complex circuit in vivo.</jats:p>

    DOI: 10.1016/j.celrep.2024.113798

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  • 【代謝】代謝と神経 PI(4,5)P2代謝と神経変性の分子基盤

    新田 陽平, 小坂 二郎, 杉江 淳

    生体の科学   74 ( 5 )   422 - 423   2023.10

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    Language:Japanese   Publisher:(公財)金原一郎記念医学医療振興財団  

    <文献概要>ホスファチジルイノシトール4,5-ビスリン酸[PI(4,5)P2]は生体膜を構成するリン脂質の一種であり,細胞膜に局在して多種多様な機能を発揮する。また,PI(4,5)P2は分解されて二次メッセンジャーとしても機能する。本稿では,PI(4,5)P2の機能を紹介し,その代謝がいかに調節されているか,そしてその調節異常が引き起こす神経変性の分子基盤を述べる。

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  • Direct evaluation of neuroaxonal degeneration with the causative genes of neurodegenerative diseases in <i>Drosophila</i> using the automated axon quantification system, MeDUsA

    Yohei Nitta, Hiroki Kawai, Ryuto Maki, Jiro Osaka, Satoko Hakeda-Suzuki, Yoshitaka Nagai, Karolína Doubková, Tomoko Uehara, Kenji Watanabe, Kenjiro Kosaki, Takashi Suzuki, Gaia Tavosanis, Atsushi Sugie

    Human Molecular Genetics   32 ( 9 )   1524 - 1538   2023.4

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Oxford University Press ({OUP})  

    <jats:title>Abstract</jats:title>
    <jats:p>Drosophila is an excellent model organism for studying human neurodegenerative diseases (NDs). However, there is still almost no experimental system that could directly observe the degeneration of neurons and automatically quantify axonal degeneration. In this study, we created MeDUsA (a ‘method for the quantification of degeneration using fly axons’), a standalone executable computer program based on Python that combines a pre-trained deep-learning masking tool with an axon terminal counting tool. This software automatically quantifies the number of retinal R7 axons in Drosophila from a confocal z-stack image series. Using this software, we were able to directly demonstrate that axons were degenerated by the representative causative genes of NDs for the first time in Drosophila. The fly retinal axon is an excellent experimental system that is capable of mimicking the pathology of axonal degeneration in human NDs. MeDUsA rapidly and accurately quantifies axons in Drosophila photoreceptor neurons. It enables large-scale research into axonal degeneration, including screening to identify genes or drugs that mediate axonal toxicity caused by ND proteins and diagnose the pathological significance of novel variants of human genes in axons.</jats:p>

    DOI: 10.1093/hmg/ddac307

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    Other Link: https://academic.oup.com/hmg/article-pdf/32/9/1524/50045443/ddac307.pdf

  • Identification of genes regulating stimulus-dependent synaptic assembly in &lt;i&gt;Drosophila&lt;/i&gt; using an automated synapse quantification system

    Jiro Osaka, Haruka Yasuda, Yusuke Watanuki, Yuya Kato, Yohei Nitta, Atsushi Sugie, Makoto Sato, Takashi Suzuki

    Genes &amp; Genetic Systems   97 ( 6 )   297 - 309   2022.12

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Genetics Society of Japan  

    Neural activity-dependent synaptic plasticity is an important physiological phenomenon underlying environmental adaptation, memory and learning. However, its molecular basis, especially in presynaptic neurons, is not well understood. Previous studies have shown that the number of presynaptic active zones in the Drosophila melanogaster photoreceptor R8 is reversibly changed in an activity-dependent manner. During reversible synaptic changes, both synaptic disassembly and assembly processes were observed. Although we have established a paradigm for screening molecules involved in synaptic stability and several genes have been identified, genes involved in stimulus-dependent synaptic assembly are still elusive. Therefore, the aim of this study was to identify genes regulating stimulus-dependent synaptic assembly in Drosophila using an automated synapse quantification system. To this end, we performed RNAi screening against 300 memory-defective, synapse-related or transmembrane molecules in photoreceptor R8 neurons. Candidate genes were narrowed down to 27 genes in the first screen using presynaptic protein aggregation as a sign of synaptic disassembly. In the second screen, we directly quantified the decreasing synapse number using a GFP-tagged presynaptic protein marker. We utilized custom-made image analysis software, which automatically locates synapses and counts their number along individual R8 axons, and identified cirl as a candidate gene responsible for synaptic assembly. Finally, we present a new model of stimulus-dependent synaptic assembly through the interaction of cirl and its possible ligand, ten-a. This study demonstrates the feasibility of using the automated synapse quantification system to explore activity-dependent synaptic plasticity in Drosophila R8 photoreceptors in order to identify molecules involved in stimulus-dependent synaptic assembly.

    DOI: 10.1266/ggs.22-00114

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  • MeDUsA: A novel system for automated axon quantification to evaluate neuroaxonal degeneration

    Yohei Nitta, Hiroki Kawai, Jiro Osaka, Satoko Hakeda-Suzuki, Yoshitaka Nagai, Karolína Doubková, Takashi Suzuki, Gaia Tavosanis, Atsushi Sugie

    2021.10

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Cold Spring Harbor Laboratory  

    Abstract

    Background

    Drosophila is an excellent model organism for studying human neurodegenerative diseases (NDs), and the rough eye phenotype (REP) assay is a convenient experimental system for analysing the toxicity of ectopically expressed human disease genes. However, the association between REP and axonal degeneration, an early sign of ND, remains unclear. To address this question, we developed a method to evaluate axonal degeneration by quantifying the number of retinal R7 axons in Drosophila; however, it requires expertise and is time-consuming. Therefore, there is a need for an easy-to-use software that can automatically quantify the axonal degeneration.

    Result

    We created MeDUsA (a ‘method for the quantification of degeneration using fly axons’), which is a standalone executable computer program based on Python that combines a pre-trained deep-learning masking tool with an axon terminal counting tool. This software automatically quantifies the number of axons from a confocal z-stack image series. Using this software, we have demonstrated for the first time directly that axons degenerate when the causative factors of NDs (αSyn, Tau, TDP-43, HTT) were expressed in the Drosophila eye. Furthermore, we compared axonal toxicity of the representative causative genes of NDs and their pathological alleles with REP and found no significant correlation between them.

    Conclusions

    MeDUsA rapidly and accurately quantifies axons in Drosophila eye. By simplifying and automating time-consuming manual efforts requiring significant expertise, it enables large-scale, complex research efforts on axonal degeneration, such as screening to identify genes or drugs that mediate axonal toxicity caused by ND disease proteins.

    DOI: 10.1101/2021.10.25.465674

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  • Systematic identification of genes regulating synaptic remodeling in the &lt;i&gt;Drosophila&lt;/i&gt; visual system

    Tomohiro Araki, Jiro Osaka, Yuya Kato, Mai Shimozono, Hinata Kawamura, Riku Iwanaga, Satoko Hakeda-Suzuki, Takashi Suzuki

    Genes &amp; Genetic Systems   95 ( 3 )   101 - 110   2020.6

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:Genetics Society of Japan  

    DOI: 10.1266/ggs.19-00066

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  • Cell surface molecule, Klingon, mediates the refinement of synaptic specificity in the<i>Drosophila</i>visual system

    Mai Shimozono, Jiro Osaka, Yuya Kato, Tomohiro Araki, Hinata Kawamura, Hiroki Takechi, Satoko Hakeda-Suzuki, Takashi Suzuki

    Genes to Cells   24 ( 7 )   496 - 510   2019.7

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Wiley  

    DOI: 10.1111/gtc.12703

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Presentations

  • Toll-mediate Signaling Regulates the Light Stress Robustness of Photoreceptor

    16th Japanese Drosophila Research Conference 

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    Event date: 2024.9

    Language:English   Presentation type:Oral presentation (general)  

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  • Toll-mediate Signaling Regulates the Light Stress Robustness of Photoreceptor

    The 47th annual meeting of the Japan Neuroscience Society 

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    Event date: 2024.7

    Language:English   Presentation type:Oral presentation (general)  

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  • Complex Formation of Immunoglobulin Superfamily Molecules Side-IV and Beat-IIb Regulates Synaptic Specificity

    The Asia Pacific Drosophila Neurobiology Conference 3 

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    Event date: 2024.2 - 2024.3

    Language:English   Presentation type:Poster presentation  

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  • Complex Formation of Immunoglobulin Superfamily Molecules Side-IV and Beat-IIb Regulates Synaptic Specificity

    The 13th NIPS-BRI-EHUB Joint Symposium 

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    Event date: 2024.2

    Language:English   Presentation type:Poster presentation  

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  • Beat-Side transmembrane protein families regulate synaptic specificity in the Drosophila visual system

    The 45th Annual Meeting of the Molecular Biology Society of Japan 

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    Event date: 2022.11 - 2022.12

    Language:English   Presentation type:Poster presentation  

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  • Beat-Side transmembrane protein families regulate synaptic specificity in the Drosophila visual system

    15th Japanese Drosophila Research Conference 

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    Event date: 2022.9

    Language:English   Presentation type:Oral presentation (general)  

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  • Beat-Side transmembrane protein families regulate synaptic specificity in the Drosophila visual system

    The 45th annual meeting of the Japan Neuroscience Society 

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    Event date: 2022.6 - 2022.7

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  • Establishing the synaptic specificity through transmembrane ligand-receptor clustering in the visual system

    14th Japanese Drosophila Research Conference 

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    Event date: 2021.9

    Language:English   Presentation type:Poster presentation  

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  • Functional differences between mitochondrial fusion proteins for axonal degeneration in a Drosophila model of normal tension glaucoma

    The 43th annual meeting of the Japan Neuroscience Society 

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    Event date: 2020.7 - 2020.8

    Language:English   Presentation type:Oral presentation (general)  

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  • RNAi screening for synaptic stabilizing and destabilizing molecules in photoreceptor neuron

    The 42th annual meeting of the Japan Neuroscience Society 

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    Event date: 2019.7

    Language:English   Presentation type:Poster presentation  

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  • Effect of neuronal firings to synaptic plasticity and mitochondria

    The 41th Annual Meeting of the Molecular Biology Society of Japan 

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    Event date: 2018.11

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  • RNAi screening for synaptic stabilization and destabilization molecules in photoreceptor neuron

    13th Japanese Drosophila Research Conference 

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    Event date: 2018.9

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  • Effect of neuronal firings to synaptic plasticity and mitochondria

    The 41th annual meeting of the Japan Neuroscience Society 

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    Event date: 2018.7

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Awards

  • 学長賞

    2024.8   新潟大学  

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  • NEURO2024 若手育成道場 優秀発表賞

    2024.7   NEURO2024  

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  • 東京工業大学 高宮賞

    2018.3   東京工業大学  

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  • 東京工業大学 優秀学生賞

    2018.3   東京工業大学  

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Research Projects

  • ショウジョウバエ疾患モデルを応用したDOA-plus遺伝子治療法の開発

    Grant number:24K19784

    2024.4 - 2027.3

    System name:科学研究費助成事業

    Research category:若手研究

    Awarding organization:日本学術振興会

    小坂 二郎

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    Grant amount:\4680000 ( Direct Cost: \3600000 、 Indirect Cost:\1080000 )

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  • ドミナントネガティブ効果を回避する改変型OPA1によるDOA-plus治療法開発

    Grant number:24KJ0089

    2024.4 - 2027.3

    System name:科学研究費助成事業

    Research category:特別研究員奨励費

    Awarding organization:日本学術振興会

    小坂 二郎

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    Grant amount:\5850000 ( Direct Cost: \4500000 、 Indirect Cost:\1350000 )

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  • ドミナントネガティブ効果を回避する改変型OPA1を用いたDOA-plusに対する治療法の開発

    Grant number:23K19651

    2023.8 - 2024.3

    System name:科学研究費助成事業

    Research category:研究活動スタート支援

    Awarding organization:日本学術振興会

    小坂 二郎

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    Grant amount:\2860000 ( Direct Cost: \2200000 、 Indirect Cost:\660000 )

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  • Igスーパーファミリータンパク質による神経間接続特異性を規定する分子基盤の解明

    Grant number:21J12660

    2021.4 - 2023.3

    System name:科学研究費助成事業

    Research category:特別研究員奨励費

    Awarding organization:日本学術振興会

    小坂 二郎

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    Grant amount:\1500000 ( Direct Cost: \1500000 )

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