Updated on 2026/05/03

写真a

 
TAMARU Shiyotaro
 
Organization
Academic Assembly Institute of Science and Technology NOUGAKU KEIRETSU Assistant Professor
Graduate School of Science and Technology Life and Food Sciences Assistant Professor
Faculty of Agriculture Department of Agriculture Assistant Professor
Title
Assistant Professor
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Research History (researchmap)

  • Niigata University   Faculty of Agriculture Department of Agriculture   Assistant Professor

    2026.4

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  • Fukui Prefectural University   Graduate School of Bioscience and Biotechnology   JSPS research fellowship for postdoctoral researcher

    2024.4 - 2026.3

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Research History

  • Niigata University   Environmental Science and Technology, Institute of Science and Technology, Academic Assembly   Assistant Professor

    2026.4

  • Niigata University   Department of Agriculture, Faculty of Agriculture   Assistant Professor

    2026.4

  • Niigata University   Life and Food Sciences, Graduate School of Science and Technology   Assistant Professor

    2026.4

Education

  • 鹿児島大学大学院   連合農学研究科

    2021.4 - 2024.3

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  • 鹿児島大学大学院   農林水産学研究科

    2019.4 - 2021.3

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  • Kagoshima University   Faculty of Agriculture

    2015.4 - 2019.3

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Professional Memberships

 

Papers

  • Temperature-humidity interactions shape stomatal dynamics and leaf cooling in tropical Capsicum

    Keita Goto, Shotaro Tamaru, Emmanuel Odama, Younghwan Ju, Jun-Ichi Sakagami

    Acta Physiologiae Plantarum   47 ( 12 )   2025.11

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    Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    DOI: 10.1007/s11738-025-03868-4

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    Other Link: https://link.springer.com/article/10.1007/s11738-025-03868-4/fulltext.html

  • Root water uptake and photosynthesis synergistically enhance drought tolerance in interspecific hybrid sugarcane

    Naoya Katsuhama, Shotaro Tamaru, Shin Yabuta, Wataru Yamori, Jun-Ichi Sakagami

    Plant Production Science   1 - 13   2025.10

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    Publishing type:Research paper (scientific journal)   Publisher:Informa UK Limited  

    DOI: 10.1080/1343943x.2025.2575199

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  • A guide to observing, recording and image analysis of spatial root distribution and root growth in the rhizobox

    Shotaro TAMARU, Hinako SHIBA, Shota TERAMOTO, Takuya KOYAMA, Masako DANNOURA, Ryouske TAJIMA, Ryo NISHIJIMA, Tomonori TSUNODA, Katsuhiro SHIONO

    Root Research   34 ( 3 )   37 - 46   2025.9

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    Authorship:Lead author   Publishing type:Research paper (scientific journal)   Publisher:Japanese Society for Root Research  

    DOI: 10.3117/rootres.34.37

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  • Halopriming in the submergence-tolerant rice variety improved the resilience to salinity and combined salinity-submergence at the seedling stage. International journal

    Julie Ann Mher Alcances Libron, Hana Haruna Putri, Emmanuel Kiprono Bore, Rael Chepkoech, Isao Akagi, Emmanuel Odama, Keita Goto, Shotaro Tamaru, Shin Yabuta, Jun-Ichi Sakagami

    Plant physiology and biochemistry : PPB   208   108494 - 108494   2024.3

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    Language:English   Publishing type:Research paper (scientific journal)  

    The role of halopriming in alleviating the detrimental effects of salinity and combined salinity-submergence was evaluated using two rice genotypes, "IR06F148" (anaerobic germination + submergence tolerant [Sub1]) and "Salt-star" (salt tolerant) with contrasting levels of tolerance. Nonprimed seeds and those primed with 1% calcium chloride (CaCl2) were germinated, and the seedlings were exposed to salinity (50 or 100 mM sodium chloride [NaCl]) and submergence (nonsaline or saline water). Salinity substantially inhibited plant height, shoot/root dry mass, and leaf area. Priming improved the resilience to 50 mM NaCl by increasing the chlorophyll content and lowering hydrogen peroxide (H2O2) production; and to 100 mM NaCl by increasing the total soluble sugars. However, apparent differences in the responses of primed "Salt-star", such as an increase in the Na+, K+, and Ca2+ levels, indicated that halopriming differentially affected the response to salt based on the salinity tolerance of the variety. Submergence reduced the shoot biomass, chlorophyll, and photosynthetic efficiency to a greater extent in "Salt-star" than in "IR06F148". Priming, especially in "Salt-star", caused a lesser reduction in the chlorophyll (Chl) and maximum quantum yield of photosystem II (Fv/Fm) but increased the total soluble sugars post-submergence, indicating a boost in the photosynthetic efficiency. The responses of the two varieties to submergence depended on their tolerance, and halopriming affected each variety differently. The metabolic and molecular changes induced by halopriming in submergence-tolerant rice may be explored further to understand the underlying mechanisms of improved resilience.

    DOI: 10.1016/j.plaphy.2024.108494

    PubMed

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  • Spatial O2 Profile in Coix lacryma-jobi and Sorghum bicolor along the Gas Diffusion Pathway under Waterlogging Conditions. International journal

    Shotaro Tamaru, Keita Goto, Jun-Ichi Sakagami

    Plants (Basel, Switzerland)   13 ( 1 )   2023.12

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    Language:English   Publishing type:Research paper (scientific journal)  

    While internal aeration in plants is critical for adaptation to waterlogging, there is a gap in understanding the differences in oxygen diffusion gradients from shoots to roots between hypoxia-tolerant and -sensitive species. This study aims to elucidate the differences in tissue oxygen concentration at various locations on the shoot and root between a hypoxia-tolerant species and a -sensitive species using a microneedle sensor that allows for spatial oxygen profiling. Job's tears, a hypoxia-tolerant species, and sorghum, a hypoxia-susceptible species, were tested. Plants aged 10 days were acclimated to a hypoxic agar solution for 12 days. Oxygen was profiled near the root tip, root base, root shoot junction, stem, and leaf. An anatomical analysis was also performed on the roots used for the O2 profile. The oxygen partial pressure (pO2) values at the root base and tip of sorghum were significantly lower than that of the root of Job's tears. At the base of the root of Job's tears, pO2 rapidly decreased from the root cortex to the surface, indicating a function to inhibit oxygen leakage. No significant differences in pO2 between the species were identified in the shoot part. The root cortex to stele ratio was significantly higher from the root tip to the base in Job's tears compared to sorghum. The pO2 gradient began to differ greatly at the root shoot junction and root base longitudinally, and between the cortex and stele radially, between Job's tears and sorghum. Differences in the root oxygen retention capacity and the cortex to stele ratio are considered to be related to differences in pO2.

    DOI: 10.3390/plants13010003

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  • Oxygen consumption and transportation in rice roots are highly dependent on leaf area and root dry weight ratio

    Shotaro Tamaru, Shin Yabuta, Keita Goto, Phanthasin Khanthavong, Jun Ichi Sakagami

    Rhizosphere   25   2023.3

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    Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.rhisph.2022.100644

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  • Root hypoxia causes oxidative damage on photosynthetic apparatus and interacts with light stress to trigger abscission of lower position leaves in Capsicum

    Keita Goto, Shin Yabuta, Shotaro Tamaru, Peter Ssenyonga, Bore Emanuel, Naoya Katsuhama, Jun Ichi Sakagami

    Scientia Horticulturae   305   2022.11

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    Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.scienta.2022.111337

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  • Vitality of primed rice seeds sown under prolonged dry soil conditions in an upland field

    Yoshihiro Nakao, Shotaro Tamaru, Shin Yabuta, Jun Ichi Sakagami

    Crop Science   62 ( 3 )   1277 - 1287   2022.5

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    Publishing type:Research paper (scientific journal)  

    DOI: 10.1002/csc2.20736

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  • The productivity of cassava (Manihot esculenta crantz) in kagoshima, japan, which belongs to the temperate zone

    Shin Yabuta, Tamami Fukuta, Shotaro Tamaru, Keita Goto, Yoshihiro Nakao, Phanthasin Khanthavong, Peter Ssenyonga, Jun Ichi Sakagami

    Agronomy   11 ( 10 )   2021.10

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    Publishing type:Research paper (scientific journal)  

    DOI: 10.3390/agronomy11102021

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  • Response of leaf water potential, stomatal conductance and chlorophyll content under different levels of soil water, air vapor pressure deficit and solar radiation in chili pepper (Capsicum chinense)

    Keita Goto, Shin Yabuta, Peter Ssenyonga, Shotaro Tamaru, Jun Ichi Sakagami

    Scientia Horticulturae   281   2021.4

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    Publishing type:Research paper (scientific journal)  

    DOI: 10.1016/j.scienta.2021.109943

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MISC

Presentations

  • 二次元酸素オプトードにより時空間的に可視化されたイネ苗立ち期の根伸長と酸素ダイナミクス

    田丸翔太郎, 藤原七海, 芝日菜子, 塩野克宏

    日本作物学会第258回講演会 

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    Event date: 2024.9

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  • 時空間的酸素イメージング技術でチャレンジ!水中でのイネの出芽:定着時、根からの酸素放出は伸長に影響を与えるのか

    田丸翔太郎, 藤原七海, 芝日菜子, 塩野克宏

    日本育種学会第146回講演会 

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    Event date: 2024.9

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  • 二次元酸素オプトードによるイネ幼苗期の冠根伸長と根圏酸化の時空間的追跡

    田丸翔太郎, 藤原七海, 芝日菜子, 塩野克宏

    第59回根研究集会 

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    Event date: 2024.7

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  • イネ科作物は低酸素環境にて呼吸維持に必要な根系形成を誘導する

    田丸翔太郎, 勝濱直椰, 後藤啓太, 籔田伸, 坂上潤一

    第57回根研究集会 

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    Event date: 2023.5

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  • 数種のイネ科作物の根の低酸素ストレスが乾物生産に及ぼす影響

    田丸翔太郎, 勝濱直椰, 後藤啓太, 籔田伸, 坂上潤一

    日本作物学会第255回講演会 

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    Event date: 2023.3

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  • Effect of rhizosphere root oxygen deficiency on root distribution and oxygen concentration profiles in maize and rice

    P. Khanthavong, S. Tamaru, S. Yabuta, J. Sakagami

    第56回根研究集会  2022.9 

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    Event date: 2022.9

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  • キビおよびシコクビエの根への低酸素ストレスが根形態と地上部特性に及ぼす影響

    田丸翔太郎, 勝濱直椰, 後藤啓太, 籔田伸, 坂上潤一

    第56回根研究集会 

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    Event date: 2022.9

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  • サトウキビ生育初期における乾燥ストレス耐性に資する形態的・生理的特性

    勝濵直椰, 田丸翔太, 籔田伸, 坂上潤一

    日本熱帯農業学会 第 131 回講演会 

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    Event date: 2022.3

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  • Root Anatomical Traits Related to Root Oxygen Consumption and Transportation between Upland Rice and Lowland Rice Varieties

    Shotaro. Tamaru, Keita. Goto, Phanthasin. Khanthavong, Shin. Yabuta, Jun-Ichi. Sakagami

    10th Asian Crop Science Association Conference 

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    Event date: 2021.9

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  • 乾燥土壌条件下で長期間埋設されたイネのプライミング種子における生存能力の検討

    中尾 祥宏, 田丸 翔太郎, 籔田 伸, 坂上 潤一

    第251回日本作物学会講演会 

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    Event date: 2021.3

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  • イネの根の酸素漏出速度と酸素消費速度が0.1%寒天水耕液の溶存酸素濃度に与える影響

    田丸翔太郎, 薮田伸, 坂上潤一

    日本作物学会第251回講演会 

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    Event date: 2021.3

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  • 嫌気条件下における栽培イネ種子根の破生通気組織及び根の組織サイズの反応

    田丸翔太郎, 薮田伸, 坂上潤一

    日本作物学会第249回講演会 

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    Event date: 2020.3

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  • キャッサバの葉の厚さがクロロフィル含量とSPAD値の相関性に及ぼす影響

    田丸翔太郎, 薮田伸, 坂上潤一

    日本作物学会第248回講演会 

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    Event date: 2019.9

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  • Relationship between spatial-temporal oxygen dynamics and root elongation during rice seedling establishment under anaerobic conditions

    Shotaro Tamaru, Nanami Fujiwara, Hinako Shiba, Katsuhiro Shiono

    ISPLORE2025  2025.9 

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    Presentation type:Oral presentation (general)  

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  • 野生イネO. glumaepatulaが湛水に対して誘導的に発達させる地表根に関わる遺伝子領域の推定

    田丸翔太郎, 宮下智貴, 片山晃汰, 木元添麻, 徳尾日向子, 宇賀優作, 塩野克宏

    日本育種学会第148回講演会  2025.9 

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  • Imaging oxygen dynamics and root elongation during rice seedling establishment under waterlogged conditions

    Shotaro Tamaru, Nanami Fujiwara, Hinako Shiba, Katsuhiro Shiono

    Rhizosphere6  2025.6 

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    Presentation type:Oral presentation (general)  

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  • Searching for Genes Related to Waterlogging-Inducive Soil-Surface Root Formation in Wild Rice (Oryza glumaepatula)

    Shotaro Tamaru, Tomoki Miyashita, Kouta Katayama, Tenma Kimoto, Hinako Tokuo, Yusaku Uga, Katsuhiro Shiono

    11th Asian Crop Science Association Conference (ACSAC11)  2025.5 

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  • アマゾン川流域に自生する野生イネOryza glumaepatulaの根に焦点をあてた土壌還元ストレス耐性遺伝子の探索

    江尻真斗, 宮下智貴, 西嶋遼, 田丸翔太郎, 馬場美幸, 芝日菜子, 三浦孝太郎, 宇賀優作, 山形悦透, 塩野克宏

    日本育種学会第146回講演会, ワークショップ いいね!!やせいいね2!!  2024.9 

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  • The application of O2 imaging to biosensing: Tracking markers of oxygen supply to plant root tip essential for their exploration into hypoxic regions by planar O2 optode

    Shotaro Tamaru, Nanami Fujiwara, Hinako Shiba, Katsuhiro Shiono

    9th Japanese-German Joint Seminar. Molecular Imaging Technology for Interdisciplinary Research  2024.8 

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  • Light to open new field for plant science: a study of dynamics of plant acclimation under hypoxic conditions

    Hinako Shiba, Shotaro Tamaru, Nanami Fujiwara, Kazumasa Oguri, Yasuhiro Egami, Morten Larsen, Ronnie N. Glud, Katsuhiro Shiono

    9th Japanese-German Joint Seminar, Molecular Imaging Technology for Interdisciplinary Research  2024.8 

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  • At What Point of the Oxygen Diffusion Process from Shoot to Root Does the Difference in Oxygen Transport Capacity between Hypoxia Tolerant and Sensitive Species Occurs?

    Shotaro Tamaru, Jun-Ichi Sakagami

    2023 ASA-CSSA-SSSA International Annual Meeting  2023.10 

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  • New Insights in Crop Biomonitoring: Turgor Pressure Reflecting Dynamics of Water and Energy Resources and Abiotic Stressors in a Tropical Climate

    Keita Goto, Benyamin Lakitan, Sabaruddin Kadir, Hana Haruna Putri, Shotaro Tamaru, Jun-Ichi Sakagami

    2023 ASA, CSSA, SSSA International Annual Meeting  2023.10 

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  • トウガラシ(Capsicum spp.)の高温回避メカニズムの解析

    後藤啓太, 田丸翔太郎, 薮田伸, 坂上潤一

    日本熱帯農業学会第131回講演会  2022.3 

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  • Anaerobic and high light stress-induced leaf abscission in chili pepper (Capsicum spp.)

    Keita Goto, Shotaro Tamaru, Peter Balyejusa Ssenyonga, Emmanuel Kiprono Bore, Shin Yabuta, Jun-Ichi Sakagami

    10th Asian Crop Science Association Conference (ACSAC10)  2021.9 

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  • 栄養繫殖性作物キャッサバへの数種プライミング法の適用と初期成長への影響

    籔田 伸, Odama Emmanuel, 田丸 翔太朗, 後藤 啓太, Chepkoech Rael, 坂上 潤一

    第256回日本作物学会講演会 

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Awards

  • 優秀発表賞

    2024.7   根研究学会   二次元酸素オプトードによるイネ幼苗期の冠根伸長と根圏酸化の時空間的追跡

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    Award type:Award from Japanese society, conference, symposium, etc. 

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Research Projects

  • 野生イネの地表根誘導メカニズムの解明

    Grant number:24KJ1880

    2024.4 - 2027.3

    System name:科学研究費助成事業

    Research category:特別研究員奨励費

    Awarding organization:日本学術振興会

    田丸 翔太郎

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    Grant amount:\3770000 ( Direct Cost: \2900000 、 Indirect Cost:\870000 )

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Teaching Experience

  • 植物生産学実験実習IV

    2026
    Institution name:新潟大学

  • 植物生産学実験実習III

    2026
    Institution name:新潟大学

  • 植物生産学実験実習II

    2026
    Institution name:新潟大学

  • 植物生産学実験実習I

    2026
    Institution name:新潟大学